RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TSPAN15O95858 294 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 C10orf91Q5T1B1 145 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 C16orf82Q7Z2V1 217 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 TRGV9Q99603 122 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 CCDC168Q8NDH2 2452 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 AMBPP02760 352 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 GAGE5Q13069 117 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 GAGE6Q13070 117 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 UNQ5815/PRO19632Q6UWF5 114 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 LCN15Q6UWW0 184 aa6.43□□□□□ -1.38
BRCA1-208ENST00000468300 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ICAM4Q14773 271 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ECSCRQ19T08 205 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ACOT6Q3I5F7 207 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF709Q8N972 641 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 CREBBPQ92793 2442 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 MAP1LC3B2A6NCE7 125 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 OR5G3P0C626 314 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 FABP4P15090 132 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 VAMP3Q15836 100 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 MAP1LC3BQ9GZQ8 125 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ZMAT4Q9H898 229 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 COLCA2A8K830 154 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 FCGR2BP31994 310 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-208ENST00000468300 MIR17HGQ75NE6 70 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 SLC35E3Q7Z769 313 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
BRCA1-208ENST00000468300 SIGLECL1Q8N7X8 197 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 FAM167A-AS1Q96KT0 104 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 TNFRSF19Q9NS68 423 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF580Q9UK33 172 aa6.42□□□□□ -1.38
BRCA1-208ENST00000468300 IGLV1-40P01703 118 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 IGHV3-23P01764 117 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 TIGITQ495A1 244 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF502Q8TBZ5 544 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 MRAPQ8TCY5 172 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 PEMTQ9UBM1 199 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 CTSGP08311 255 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ADMP35318 185 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF506Q5JVG8 444 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ACTR3CQ9C0K3 210 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ZNF702PQ9H963 129 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 SMCO4Q9NRQ5 59 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 THYN1Q9P016 225 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 MYO9AB2RTY4 2548 aa6.41□□□□□ -1.38
BRCA1-208ENST00000468300 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 ZFP92A6NM28 416 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 SLC17A3O00476 420 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 PSG1P11464 419 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 SSBP4Q9BWG4 385 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-208ENST00000468300 WI2-2373I1.2A0A1W2PRP0 233 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 ARL14EPLP0DKL9 152 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 RHOGP84095 191 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 TCTEX1D4Q5JR98 221 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 FAM78BQ5VT40 261 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 C10orf99Q6UWK7 81 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 Q8N2B8 174 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 VN1R17PQ8TDU5 208 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 BAALCQ8WXS3 180 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 UHRF2Q96PU4 802 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 HSPB8Q9UJY1 196 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 FUT9Q9Y231 359 aa6.4□□□□□ -1.38
BRCA1-208ENST00000468300 ACANP16112 2415 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 IFITM10A6NMD0 228 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 MT-ND4LP03901 98 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 HIST2H2BDQ6DRA6 164 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 KCNIP2Q9NS61 270 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 MRPL27Q9P0M9 148 aaKnown RBP6.4□□□□□ -1.39
BRCA1-208ENST00000468300 NF1P21359 2839 aa6.4□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF207O43670 478 aaKnown RBP6.39□□□□□ -1.39
BRCA1-208ENST00000468300 HBE1P02100 147 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 SRP19P09132 144 aaKnown RBP6.39□□□□□ -1.39
BRCA1-208ENST00000468300 PRR31Q5SQ13 230 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF491Q8N8L2 437 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 MS4A10Q96PG2 267 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 C21orf62Q9NYP8 219 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 DOK5Q9P104 306 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 OR2T8A6NH00 312 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 TOMM40O96008 361 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 IFNA1P01562 189 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 SFTA3P0C7M3 94 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 BCL2P10415 239 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 KHDC3LQ587J8 217 aa6.39□□□□□ -1.39
BRCA1-208ENST00000468300 LY6G6DO95868 133 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms