RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 STX12Q86Y82 276 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
SSBP1-207ENST00000468267 TRAV10A0A0B4J240 114 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 TMEM189A5PLL7 270 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 IGLL5B9A064 214 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 INMT-MINDY4F8WBC2 141 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRAF2O60831 178 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 SIX6O95475 246 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 CXCL3P19876 107 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 HBG1P69891 147 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 HBG2P69892 147 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRR20EP86478 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRR20CP86479 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRR20DP86480 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRR20BP86481 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PRR20AP86496 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 PSG3Q16557 428 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 C10orf113Q5VZT2 155 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 MIC13Q5XKP0 118 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 Q6ZRG5 221 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 MARVELD1Q9BSK0 173 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 BATF3Q9NR55 127 aa12.27□□□□□ -0.45
SSBP1-207ENST00000468267 AMBPP02760 352 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 CXCL2P19875 107 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 OPCMLQ14982 345 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 ATP6V1FQ16864 119 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 MORN5Q5VZ52 161 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 BPIFA4PQ86YQ2 179 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 NMES1Q9C002 83 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 APLNQ9ULZ1 77 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
SSBP1-207ENST00000468267 UBE2L5PA0A1B0GUS4 154 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 RPL29P47914 159 aaKnown RBP12.25□□□□□ -0.45
SSBP1-207ENST00000468267 BAXQ07812 192 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 LCN15Q6UWW0 184 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 ZNF767PQ75MW2 155 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 OR1L4Q8NGR5 311 aa12.25□□□□□ -0.45
SSBP1-207ENST00000468267 M0R2Z0 102 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 HBE1P02100 147 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 RLN2P04090 185 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 SPART-AS1P0CW21 52 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 EMP1P54849 157 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 DEFA1P59665 94 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 DEFA3P59666 94 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 CYCSP99999 105 aaKnown RBP12.24□□□□□ -0.45
SSBP1-207ENST00000468267 SPINK13Q1W4C9 94 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 PFDN5Q99471 154 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 SLC50A1Q9BRV3 221 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 ZNF331Q9NQX6 463 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-207ENST00000468267 SLC39A9Q9NUM3 307 aa12.24□□□□□ -0.45
SSBP1-207ENST00000468267 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 E5RGE8 158 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
SSBP1-207ENST00000468267 SNRPCP09234 159 aaKnown RBP12.23□□□□□ -0.45
SSBP1-207ENST00000468267 IGLC2P0DOY2 106 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 FGF7P21781 194 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 B2MP61769 119 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 HIST1H1AQ02539 215 aaPredicted RBP12.23□□□□□ -0.45
SSBP1-207ENST00000468267 NHLH2Q02577 135 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 RPUSD4Q96CM3 377 aaKnown RBP12.23□□□□□ -0.45
SSBP1-207ENST00000468267 TMEM208Q9BTX3 173 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 OR5AC2Q9NZP5 309 aa12.23□□□□□ -0.45
SSBP1-207ENST00000468267 BIRC6Q9NR09 4857 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 TRAV5A0A0B4J249 113 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 H0YIZ8 118 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 MPDU1O75352 247 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 INSP01308 110 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 H2BFSP57053 126 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 RRN3P1Q2M238 152 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 SAT2Q96F10 170 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-207ENST00000468267 RNF126Q9BV68 326 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 SLC25A31Q9H0C2 315 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 DKK2Q9UBU2 259 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
SSBP1-207ENST00000468267 IGHV4-4A0A075B6R2 117 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 LOC102723971A0A1B0GUV8 181 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 H3BQ15 152 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 H3BTX0 84 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 BOLA2-SMG1P6H3BVE0 249 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 SLC17A3O00476 420 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 RHOBP62745 196 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 LRRC37A5PQ49AS3 106 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 FAM222AQ5U5X8 452 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 RPP25LQ8N5L8 163 aaKnown RBP12.21□□□□□ -0.45
SSBP1-207ENST00000468267 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.45
SSBP1-207ENST00000468267 PRB4P10163 310 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-207ENST00000468267 GUK1Q16774 197 aa12.2□□□□□ -0.46
SSBP1-207ENST00000468267 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
SSBP1-207ENST00000468267 NIPSNAP3BQ9BS92 247 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms