RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 SLC50A1Q9BRV3 221 aa14.64□□□□□ -0.07
NPHP4-206ENST00000468253 C1QTNF4Q9BXJ3 329 aa14.64□□□□□ -0.07
NPHP4-206ENST00000468253 ZNF331Q9NQX6 463 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-206ENST00000468253 TNFSF18Q9UNG2 199 aa14.64□□□□□ -0.07
NPHP4-206ENST00000468253 TIMM9Q9Y5J7 89 aa14.64□□□□□ -0.07
NPHP4-206ENST00000468253 A8MTW9 85 aa14.63□□□□□ -0.07
NPHP4-206ENST00000468253 C3orf84H3BNL1 204 aa14.63□□□□□ -0.07
NPHP4-206ENST00000468253 ZNF253O75346 499 aa14.63□□□□□ -0.07
NPHP4-206ENST00000468253 GCSAMLQ5JQS6 135 aa14.63□□□□□ -0.07
NPHP4-206ENST00000468253 GDF5OSQ5U4N7 250 aa14.63□□□□□ -0.07
NPHP4-206ENST00000468253 MRPL32Q9BYC8 188 aaKnown RBP14.63□□□□□ -0.07
NPHP4-206ENST00000468253 H3BQ15 152 aa14.62□□□□□ -0.07
NPHP4-206ENST00000468253 DUSP14O95147 198 aaKnown RBP14.62□□□□□ -0.07
NPHP4-206ENST00000468253 HIST1H1EP10412 219 aaKnown RBP14.62□□□□□ -0.07
NPHP4-206ENST00000468253 RARRES2Q99969 163 aa14.62□□□□□ -0.07
NPHP4-206ENST00000468253 AGRNO00468 2067 aa14.62□□□□□ -0.07
NPHP4-206ENST00000468253 G3V3Q6 166 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 FFAR4Q5NUL3 377 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 IGFL4Q6B9Z1 124 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 CSNK1G2-AS1Q8NCQ2 148 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 IL17DQ8TAD2 202 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 MUC7Q8TAX7 377 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 FAM167A-AS1Q96KT0 104 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 FUT9Q9Y231 359 aa14.61□□□□□ -0.07
NPHP4-206ENST00000468253 FXYD6-FXYD2A0A087WZ82 144 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 RNF222A6NCQ9 220 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 DEFB1P60022 68 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 PSG9Q00887 426 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 PDE6HQ13956 83 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 RNF182Q8N6D2 247 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 ZNF586Q9NXT0 402 aa14.6□□□□□ -0.07
NPHP4-206ENST00000468253 TRBV19A0A075B6N1 114 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 F6UB75 175 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 C4BPBP20851 252 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 RHOBP62745 196 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 ACOT6Q3I5F7 207 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-206ENST00000468253 MIR17HGQ75NE6 70 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 ZNF738Q8NE65 137 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 OR4B1Q8NGF8 309 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 OR11H2Q8NH07 326 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 SLC25A2Q9BXI2 301 aa14.59□□□□□ -0.07
NPHP4-206ENST00000468253 ZNF705EA8MWA4 302 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-206ENST00000468253 TAAR5O14804 337 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 M6PRP20645 277 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 SERF2P84101 59 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 OR8A1Q8NGG7 326 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 OR2G3Q8NGZ4 309 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 PSMG3Q9BT73 122 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-206ENST00000468253 OR51M1Q9H341 326 aa14.58□□□□□ -0.08
NPHP4-206ENST00000468253 NBEAP1P0C6P0 100 aa14.57□□□□□ -0.08
NPHP4-206ENST00000468253 Q6ZNX1 250 aa14.57□□□□□ -0.08
NPHP4-206ENST00000468253 RPUSD4Q96CM3 377 aaKnown RBP14.57□□□□□ -0.08
NPHP4-206ENST00000468253 MRPL53Q96EL3 112 aaKnown RBP14.57□□□□□ -0.08
NPHP4-206ENST00000468253 PRELID1Q9Y255 219 aa14.57□□□□□ -0.08
NPHP4-206ENST00000468253 BORCS7-ASMTA0A0B4J1R7 106 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 HMSDA8MTL9 139 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 IGKV3-20P01619 116 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 AMBPP02760 352 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 SNRPCP09234 159 aaKnown RBP14.56□□□□□ -0.08
NPHP4-206ENST00000468253 HLA-DMBP28068 263 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 CNN1P51911 297 aaKnown RBP14.56□□□□□ -0.08
NPHP4-206ENST00000468253 TAS2R45P59539 299 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 AMTNQ6UX39 209 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 RNF141Q8WVD5 230 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 GNPNAT1Q96EK6 184 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-206ENST00000468253 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 XCL2Q9UBD3 114 aa14.56□□□□□ -0.08
NPHP4-206ENST00000468253 SLC17A3O00476 420 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 JTBO76095 146 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 NDUFB4O95168 129 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 MBP02144 154 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 PYYP10082 97 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 MFFQ9GZY8 342 aa14.55□□□□□ -0.08
NPHP4-206ENST00000468253 A0A0J9YWU9 116 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 H3BTX0 84 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 MIFP14174 115 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 ATP6V0CP27449 155 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 HSD17B11Q8NBQ5 300 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 NEU1Q99519 415 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 C11orf68Q9H3H3 251 aaKnown RBP14.54□□□□□ -0.08
NPHP4-206ENST00000468253 RFNGQ9Y644 331 aa14.54□□□□□ -0.08
NPHP4-206ENST00000468253 A0A1W2PPV4 95 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 ZNF705FA8MVS1 300 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-206ENST00000468253 ARPC5O15511 151 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 KHDC3LQ587J8 217 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 RPL7L1Q6DKI1 246 aaKnown RBP14.53□□□□□ -0.08
NPHP4-206ENST00000468253 ZNF705AQ6ZN79 300 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-206ENST00000468253 LYPD1Q8N2G4 141 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 OR10G4Q8NGN3 311 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 OR10G9Q8NGN4 311 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 OR10G7Q8NGN6 311 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 FXYD5Q96DB9 178 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 SLC35B3Q9H1N7 401 aa14.53□□□□□ -0.08
NPHP4-206ENST00000468253 SMIM9A6NGZ8 99 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 ZNF345Q14585 488 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 PQLC2Q6ZP29 291 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 OR10J6PQ8NGY7 276 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 ZNF503Q96F45 646 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 X6R8D5 127 aa14.52□□□□□ -0.09
NPHP4-206ENST00000468253 SMLR1H3BR10 107 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms