RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SULT1A2P50226 295 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 PDE6HQ13956 83 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 FAM213BQ8TBF2 198 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 LRRC20Q8TCA0 184 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 RNF141Q8WVD5 230 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 C17orf77Q96MU5 243 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
SNIP1-202ENST00000468040 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 OR11H12B2RN74 326 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 EIF3GO75821 320 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNIP1-202ENST00000468040 CD7P09564 240 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 OR10J4P0C629 311 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 FHITP49789 147 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 SORL1Q92673 2214 aa11.35□□□□□ -0.59
SNIP1-202ENST00000468040 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
SNIP1-202ENST00000468040 ZNF688P0C7X2 276 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 GCHFRP30047 84 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 PSG9Q00887 426 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 ALKAL2Q6UX46 152 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 FAM24BQ8N5W8 94 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 SAT2Q96F10 170 aaPredicted RBP11.34□□□□□ -0.59
SNIP1-202ENST00000468040 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 MAP6D1Q9H9H5 199 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 ZNF331Q9NQX6 463 aaPredicted RBP11.34□□□□□ -0.59
SNIP1-202ENST00000468040 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
SNIP1-202ENST00000468040 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
SNIP1-202ENST00000468040 H3BTX0 84 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 DEFB131AP59861 70 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 Q8N1Y9 231 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 LINC00052Q96N35 136 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 C19orf73Q9NVV2 129 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 UBQLN2Q9UHD9 624 aa11.33□□□□□ -0.6
SNIP1-202ENST00000468040 TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 SLC17A3O00476 420 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 SFT2D1Q8WV19 159 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 AAMDCQ9H7C9 122 aa11.32□□□□□ -0.6
SNIP1-202ENST00000468040 ZNF705EA8MWA4 302 aaPredicted RBP11.31□□□□□ -0.6
SNIP1-202ENST00000468040 NDUFB4O95168 129 aa11.31□□□□□ -0.6
SNIP1-202ENST00000468040 FGF8P55075 233 aaPredicted RBP11.31□□□□□ -0.6
SNIP1-202ENST00000468040 TEX261Q6UWH6 196 aa11.31□□□□□ -0.6
SNIP1-202ENST00000468040 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
SNIP1-202ENST00000468040 SUN5Q8TC36 379 aa11.31□□□□□ -0.6
SNIP1-202ENST00000468040 IFNA7P01567 189 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 HBE1P02100 147 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
SNIP1-202ENST00000468040 PSG3Q16557 428 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 APRG1Q8IVJ8 170 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
SNIP1-202ENST00000468040 PRELID1Q9Y255 219 aa11.3□□□□□ -0.6
SNIP1-202ENST00000468040 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 RANP62826 216 aaKnown RBP11.29□□□□□ -0.6
SNIP1-202ENST00000468040 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 ZNF680Q8NEM1 530 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
SNIP1-202ENST00000468040 A8MZ25 164 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 BLOC1S1P78537 153 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 ICAM4Q14773 271 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 EBLN2Q6P2I7 272 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 Q9H3A6 140 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 OTORQ9NRC9 128 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 CMYA5Q8N3K9 4069 aa11.28□□□□□ -0.6
SNIP1-202ENST00000468040 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 K7EIL1 84 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 PPT1P50897 306 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
SNIP1-202ENST00000468040 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-202ENST00000468040 ARL2-SNX15V9GYD0 113 aa11.27□□□□□ -0.61
SNIP1-202ENST00000468040 A0A1B0GV50 99 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 CSN1S1P47710 185 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 DEFA6Q01524 100 aa11.26□□□□□ -0.61
SNIP1-202ENST00000468040 ZNF124Q15973 351 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms