RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 LCN15Q6UWW0 184 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 RNF182Q8N6D2 247 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 OR11H7Q8NGC8 314 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 LRRC20Q8TCA0 184 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.25
YBX1-204ENST00000467957 MBD2Q9UBB5 411 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 HSPB11Q9Y547 144 aa13.52□□□□□ -0.25
YBX1-204ENST00000467957 DYNC2H1Q8NCM8 4307 aaKnown RBP13.52□□□□□ -0.25
YBX1-204ENST00000467957 IGHV4-28A0A0C4DH34 117 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 CXorf65A6NEN9 183 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 DUSP14O95147 198 aaKnown RBP13.51□□□□□ -0.25
YBX1-204ENST00000467957 IGLC2P0DOY2 106 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
YBX1-204ENST00000467957 PSG3Q16557 428 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
YBX1-204ENST00000467957 THAP6Q8TBB0 222 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 SLC35B3Q9H1N7 401 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 HRH4Q9H3N8 390 aa13.51□□□□□ -0.25
YBX1-204ENST00000467957 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
YBX1-204ENST00000467957 LCE6AA0A183 80 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 NUPR2A6NF83 97 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 RBMY1A1P0DJD3 496 aaKnown RBP13.5□□□□□ -0.25
YBX1-204ENST00000467957 RBMY1CP0DJD4 496 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 RBMY1FQ15415 496 aaKnown RBP13.5□□□□□ -0.25
YBX1-204ENST00000467957 GUK1Q16774 197 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 AMTNQ6UX39 209 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 Q6ZNX1 250 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 ZNF738Q8NE65 137 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 NEU1Q99519 415 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 ATP5SQ99766 215 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 KCNIP2Q9NS61 270 aa13.5□□□□□ -0.25
YBX1-204ENST00000467957 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 DEFB4AO15263 64 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 HLA-DMBP28068 263 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 CNN1P51911 297 aaKnown RBP13.49□□□□□ -0.25
YBX1-204ENST00000467957 FXYD7P58549 80 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 PMS2P11Q13670 270 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 C11orf45Q8TAV5 145 aa13.49□□□□□ -0.25
YBX1-204ENST00000467957 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
YBX1-204ENST00000467957 ZNF705FA8MVS1 300 aaPredicted RBP13.48□□□□□ -0.25
YBX1-204ENST00000467957 H3BQ15 152 aa13.48□□□□□ -0.25
YBX1-204ENST00000467957 ZNF705DP0CH99 300 aaPredicted RBP13.48□□□□□ -0.25
YBX1-204ENST00000467957 ZNF705BP0CI00 300 aaPredicted RBP13.48□□□□□ -0.25
YBX1-204ENST00000467957 CEMP1Q6PRD7 247 aaPredicted RBP13.48□□□□□ -0.25
YBX1-204ENST00000467957 OR8A1Q8NGG7 326 aa13.48□□□□□ -0.25
YBX1-204ENST00000467957 ASB13Q8WXK3 278 aa13.48□□□□□ -0.25
YBX1-204ENST00000467957 TMEM14CQ9P0S9 112 aa13.48□□□□□ -0.25
YBX1-204ENST00000467957 SMIM9A6NGZ8 99 aa13.47□□□□□ -0.25
YBX1-204ENST00000467957 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
YBX1-204ENST00000467957 AMBPP02760 352 aa13.47□□□□□ -0.25
YBX1-204ENST00000467957 GCSAMLQ5JQS6 135 aa13.47□□□□□ -0.25
YBX1-204ENST00000467957 SLC17A3O00476 420 aa13.46□□□□□ -0.25
YBX1-204ENST00000467957 ZNF253O75346 499 aa13.46□□□□□ -0.25
YBX1-204ENST00000467957 SNRPCP09234 159 aaKnown RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 GIPP09681 153 aaPredicted RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 NANOS2P60321 138 aaKnown RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 RPUSD4Q96CM3 377 aaKnown RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 PARD6GQ9BYG4 376 aaPredicted RBP13.46□□□□□ -0.25
YBX1-204ENST00000467957 IFNA5P01569 189 aa13.45□□□□□ -0.26
YBX1-204ENST00000467957 IGF2BP2-AS1Q96M15 143 aa13.45□□□□□ -0.26
YBX1-204ENST00000467957 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
YBX1-204ENST00000467957 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
YBX1-204ENST00000467957 GOLT1BQ9Y3E0 138 aa13.45□□□□□ -0.26
YBX1-204ENST00000467957 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 H3BTX0 84 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 JTBO76095 146 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
YBX1-204ENST00000467957 HIST1H1AQ02539 215 aaPredicted RBP13.44□□□□□ -0.26
YBX1-204ENST00000467957 C1orf158Q8N1D5 194 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 SCGB1C1Q8TD33 95 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 MRPL32Q9BYC8 188 aaKnown RBP13.44□□□□□ -0.26
YBX1-204ENST00000467957 SMIM3Q9BZL3 60 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 LYSTQ99698 3801 aa13.44□□□□□ -0.26
YBX1-204ENST00000467957 BOLA2-SMG1P6H3BVE0 249 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 CRXO43186 299 aaPredicted RBP13.43□□□□□ -0.26
YBX1-204ENST00000467957 PDE6HQ13956 83 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 SPINK13Q1W4C9 94 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 WFDC1Q9HC57 220 aa13.43□□□□□ -0.26
YBX1-204ENST00000467957 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 TMEM189A5PLL7 270 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 M0R2Z0 102 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 RHOBP62745 196 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 MIR17HGQ75NE6 70 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 MRPL53Q96EL3 112 aaKnown RBP13.42□□□□□ -0.26
YBX1-204ENST00000467957 AQP10Q96PS8 301 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 RFNGQ9Y644 331 aa13.42□□□□□ -0.26
YBX1-204ENST00000467957 NDUFB4O95168 129 aa13.41□□□□□ -0.26
YBX1-204ENST00000467957 INSP01308 110 aa13.41□□□□□ -0.26
YBX1-204ENST00000467957 PYYP10082 97 aa13.41□□□□□ -0.26
YBX1-204ENST00000467957 FUT9Q9Y231 359 aa13.41□□□□□ -0.26
YBX1-204ENST00000467957 RYR3Q15413 4870 aa13.4□□□□□ -0.26
YBX1-204ENST00000467957 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
YBX1-204ENST00000467957 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
YBX1-204ENST00000467957 HBE1P02100 147 aa13.4□□□□□ -0.26
YBX1-204ENST00000467957 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms