RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
VARS2-204ENST00000467717 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
VARS2-204ENST00000467717 ID1P41134 155 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 RAB5CP51148 216 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 SNRPD3P62318 126 aaKnown RBP12.74□□□□□ -0.37
VARS2-204ENST00000467717 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 DPPA3Q6W0C5 159 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 FAM24BQ8N5W8 94 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 ZNF503Q96F45 646 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 PHYHIPLQ96FC7 376 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 FAM110AQ9BQ89 295 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
VARS2-204ENST00000467717 ZNF586Q9NXT0 402 aa12.74□□□□□ -0.37
VARS2-204ENST00000467717 PRB2P02812 416 aaPredicted RBP12.73□□□□□ -0.37
VARS2-204ENST00000467717 PSMB3P49720 205 aa12.73□□□□□ -0.37
VARS2-204ENST00000467717 UBE2L3P68036 154 aaKnown RBP12.73□□□□□ -0.37
VARS2-204ENST00000467717 ZNF726P1Q15940 193 aa12.73□□□□□ -0.37
VARS2-204ENST00000467717 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
VARS2-204ENST00000467717 Q8N1Y9 231 aa12.73□□□□□ -0.37
VARS2-204ENST00000467717 FXYD5Q96DB9 178 aa12.73□□□□□ -0.37
VARS2-204ENST00000467717 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
VARS2-204ENST00000467717 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 OR11H12B2RN74 326 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 H3BTX0 84 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 OR10J4P0C629 311 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 NBEAP1P0C6P0 100 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 FHITP49789 147 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 PDE6HQ13956 83 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 SSX7Q7RTT5 188 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 SAT2Q96F10 170 aaPredicted RBP12.72□□□□□ -0.37
VARS2-204ENST00000467717 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
VARS2-204ENST00000467717 TRAV8-2A0A0B4J237 113 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 ZNF253O75346 499 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 CXorf1O96002 111 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 ARL14EPLP0DKL9 152 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 SULT1A2P50226 295 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 DEFB131AP59861 70 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 PSMG4Q5JS54 123 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 BLNKQ8WV28 456 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
VARS2-204ENST00000467717 ZNF331Q9NQX6 463 aaPredicted RBP12.71□□□□□ -0.37
VARS2-204ENST00000467717 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
VARS2-204ENST00000467717 SLC17A3O00476 420 aa12.7□□□□□ -0.38
VARS2-204ENST00000467717 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
VARS2-204ENST00000467717 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
VARS2-204ENST00000467717 CLEC5AQ9NY25 188 aa12.7□□□□□ -0.38
VARS2-204ENST00000467717 NDUFB4O95168 129 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 GCHFRP30047 84 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 PSG9Q00887 426 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 FAM74A1Q5RGS3 127 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 IGFL4Q6B9Z1 124 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 SFT2D1Q8WV19 159 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 TMEM167BQ9NRX6 74 aa12.69□□□□□ -0.38
VARS2-204ENST00000467717 K7EIL1 84 aa12.68□□□□□ -0.38
VARS2-204ENST00000467717 H2AFB1P0C5Y9 115 aa12.68□□□□□ -0.38
VARS2-204ENST00000467717 APRG1Q8IVJ8 170 aa12.68□□□□□ -0.38
VARS2-204ENST00000467717 SUN5Q8TC36 379 aa12.68□□□□□ -0.38
VARS2-204ENST00000467717 C20orf173Q96LM9 149 aa12.68□□□□□ -0.38
VARS2-204ENST00000467717 FGF8P55075 233 aaPredicted RBP12.67□□□□□ -0.38
VARS2-204ENST00000467717 PSG3Q16557 428 aa12.67□□□□□ -0.38
VARS2-204ENST00000467717 IQCF2Q8IXL9 164 aa12.67□□□□□ -0.38
VARS2-204ENST00000467717 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
VARS2-204ENST00000467717 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
VARS2-204ENST00000467717 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
VARS2-204ENST00000467717 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
VARS2-204ENST00000467717 IGHV4-30-4P0DP06 118 aa12.66□□□□□ -0.38
VARS2-204ENST00000467717 RANP62826 216 aaKnown RBP12.66□□□□□ -0.38
VARS2-204ENST00000467717 TUBA4BQ9H853 241 aa12.66□□□□□ -0.38
VARS2-204ENST00000467717 SRD5A3Q9H8P0 318 aa12.66□□□□□ -0.38
VARS2-204ENST00000467717 A8MZ25 164 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 ZNF124Q15973 351 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 TEX261Q6UWH6 196 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 EXOC3-AS1Q8N2X6 119 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 CITED4Q96RK1 184 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 TMPRSS5Q9H3S3 457 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 PRELID1Q9Y255 219 aa12.65□□□□□ -0.38
VARS2-204ENST00000467717 TRAV1-1A0A0B4J248 108 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 ICAM4Q14773 271 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 RPUSD4Q96CM3 377 aaKnown RBP12.64□□□□□ -0.39
VARS2-204ENST00000467717 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
VARS2-204ENST00000467717 Q9H3A6 140 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
VARS2-204ENST00000467717 OTORQ9NRC9 128 aa12.64□□□□□ -0.39
VARS2-204ENST00000467717 A0A1B0GV50 99 aa12.63□□□□□ -0.39
VARS2-204ENST00000467717 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms