RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 ELANEP08246 267 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 OR5I1Q13606 314 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 FAM209BQ5JX69 171 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 MYOZ3Q8TDC0 251 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 ANAPC16Q96DE5 110 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 TMEM160Q9NX00 188 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 GGCTO75223 188 aaKnown RBP14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 TMEM183BQ1AE95 376 aa14.4□□□□□ -0.1
CHRNA4-203ENST00000467563 LY6G6DO95868 133 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 PRB4P10163 310 aaPredicted RBP14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 CD99P14209 185 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 C1orf194Q5T5A4 169 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 RNF152Q8N8N0 203 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 NHLRC2Q8NBF2 726 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 CMTM2Q8TAZ6 248 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 NF1P21359 2839 aa14.39□□□□□ -0.11
CHRNA4-203ENST00000467563 M0R3E3 92 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 CXCL1P09341 107 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 ATF4P18848 351 aaPredicted RBP14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 Q6ZSV7 163 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 TMEM190Q8WZ59 177 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 HIVEP2P31629 2446 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 TGIF2-C20orf24A0A0A6YYL0 155 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 UBE2G1P62253 170 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 BAGE2Q86Y30 109 aa14.38□□□□□ -0.11
CHRNA4-203ENST00000467563 ZNF320A2RRD8 509 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 CRYBA1P05813 215 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 GOLT1AQ6ZVE7 132 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 GPR82Q96P67 336 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 TRAV8-1A0A0A6YYK1 113 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 GCGP01275 180 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 PFN1P07737 140 aaKnown RBP14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 RAB5AP20339 215 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 AAMDCQ9H7C9 122 aa14.37□□□□□ -0.11
CHRNA4-203ENST00000467563 A0A087X0K7 114 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 ZNF785A8K8V0 405 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 MGST1P10620 155 aaKnown RBP14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 GALR1P47211 349 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 PSG9Q00887 426 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 IGFL4Q6B9Z1 124 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 KLHDC1Q8N7A1 406 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 OR10G8Q8NGN5 311 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 FMC1Q96HJ9 113 aa14.36□□□□□ -0.11
CHRNA4-203ENST00000467563 PPP1R2P9O14990 202 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 ZNF253O75346 499 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 IGLV2-11P01706 119 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 SRD5A1P18405 259 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 C16orf54Q6UWD8 224 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 UBE2E2Q96LR5 201 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 ZNF331Q9NQX6 463 aaPredicted RBP14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 DIRC3C9JPN6 131 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 LGALS1P09382 135 aaKnown RBP14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 SCGB2A2Q13296 93 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 GLMPQ8WWB7 406 aa14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 RNASE7Q9H1E1 156 aaKnown RBP14.35□□□□□ -0.11
CHRNA4-203ENST00000467563 LTAP01374 205 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 S100A9P06702 114 aaKnown RBP14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 HLA-DMBP28068 263 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 ERVFC1-1P60608 527 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 TM4SF20Q53R12 229 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 FOLR2P14207 255 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 GPHB5Q86YW7 130 aa14.34□□□□□ -0.11
CHRNA4-203ENST00000467563 TCTEX1D4Q5JR98 221 aa14.33□□□□□ -0.12
CHRNA4-203ENST00000467563 MLST8Q9BVC4 326 aa14.33□□□□□ -0.12
CHRNA4-203ENST00000467563 DAZ1Q9NQZ3 744 aaKnown RBP14.33□□□□□ -0.12
CHRNA4-203ENST00000467563 RNASE1P07998 156 aaKnown RBP14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 RPEL1Q2QD12 228 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 FAM106AQ4KMX7 169 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 C18orf65Q6ZTR6 163 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 Q71RC1 249 aaPredicted RBP14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 Q86TA4 180 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 V9GYV3 84 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 TRBV24-1A0A075B6N3 115 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 EDN2P20800 178 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 TMEM75Q8N9X5 138 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 OSTCQ9NRP0 149 aa14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 FLNBO75369 2602 aaKnown RBP14.32□□□□□ -0.12
CHRNA4-203ENST00000467563 IGHV4OR15-8A0A075B7B6 117 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 A0A087WW49 117 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 IGHV7-4-1A0A0J9YVY3 117 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 S100PP25815 95 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 FAM3BP58499 235 aaPredicted RBP14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 PRNTQ86SH4 94 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 ZNF418Q8TF45 676 aaPredicted RBP14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 SMIM12Q96EX1 92 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 FAM210BQ96KR6 192 aa14.31□□□□□ -0.12
CHRNA4-203ENST00000467563 ZNF705FA8MVS1 300 aaPredicted RBP14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 CSN1S1P47710 185 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 HILS1P60008 231 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 PSG3Q16557 428 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 C8orf86Q6ZUL3 223 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 C1QL4Q86Z23 238 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 RNF182Q8N6D2 247 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 PYGO2Q9BRQ0 406 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 TRAV8-2A0A0B4J237 113 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 TRBV6-1A0A0K0K1D8 114 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 A0A1W2PPQ1 181 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 K7EMT4 169 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms