RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 Q8NAQ8 132 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 NECAP1Q8NC96 275 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 OR51A2Q8NGJ7 313 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 CIRBP-AS1Q8TBR5 109 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 RMI2Q96E14 147 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 NRBF2Q96F24 287 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 OR10C1Q96KK4 312 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 ATP6V1G3Q96LB4 118 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 HSD17B10Q99714 261 aaKnown RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 SULT4A1Q9BR01 284 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 PRRG3Q9BZD7 231 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 AUNIPQ9H7T9 357 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 SPACA1Q9HBV2 294 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 TAS2R4Q9NYW5 299 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 MRPL27Q9P0M9 148 aaKnown RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 RCL1Q9Y2P8 373 aaKnown RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 SRRM2Q9UQ35 2752 aaKnown RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 IGHV3OR16-8A0A075B7F1 116 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 SMIM26A0A096LP01 95 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 TRBV7-1A0A0A6YYK4 115 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 DAPL1A0PJW8 107 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 A6NDN8 102 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 OR4C45A6NMZ5 311 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 J3QLW9 94 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 M0R1X1 148 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MRPS14O60783 128 aaKnown RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 HPRT1P00492 218 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 OXTP01178 125 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 HBE1P02100 147 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 CD74P04233 296 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 CTSDP07339 412 aaPredicted RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 RPSAP08865 295 aaKnown RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 C8orf88P0DMB2 117 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 DEFA4P12838 97 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 ANXA8P13928 327 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MIFP14174 115 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 HTN3P15516 51 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 FUSP35637 526 aaKnown RBP eCLIP1.66□□□□□ -2.14
XRN1-206ENST00000467077 ZNF93P35789 620 aaPredicted RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 SNRPGP62308 76 aaKnown RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 RPL23P62829 140 aaKnown RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 PPP3R1P63098 170 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 GPR176Q14439 515 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 RTL8BQ17RB0 113 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 C12orf74Q32Q52 190 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 COX19Q49B96 90 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MPV17L2Q567V2 206 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 AADACL4Q5VUY2 407 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 ZFP1Q6P2D0 407 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 IDO2Q6ZQW0 420 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 DEFB107AQ8IZN7 70 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 TTC9CQ8N5M4 171 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 OR52E5Q8NH55 327 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 OR5AK2Q8NH90 309 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
XRN1-206ENST00000467077 PDCD1LG2Q9BQ51 273 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 FAAP24Q9BTP7 215 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 THTPAQ9BU02 230 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 SAMD10Q9BYL1 202 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 BANF2Q9H503 90 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 TMEM138Q9NPI0 162 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 MED4Q9NPJ6 270 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 TBC1D24Q9ULP9 559 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 ZNF257Q9Y2Q1 563 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 UFC1Q9Y3C8 167 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 LRRC42Q9Y546 428 aa1.66□□□□□ -2.14
XRN1-206ENST00000467077 IGHV3-49A0A0A0MS15 119 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 A0A1B0GW64 132 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 TMEM212A6NML5 194 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 CASQ2O14958 399 aaPredicted RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 CREBL2O60519 120 aaPredicted RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 PDCD6O75340 191 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 CRTAPO75718 401 aaPredicted RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 SC5DO75845 299 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 SLC22A5O76082 557 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 CRYZL1O95825 349 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 DHFRP00374 187 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 REG1AP05451 166 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 GLAP06280 429 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 ZNF688P0C7X2 276 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 RNASE2P10153 161 aaKnown RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 CD37P11049 281 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 HIST1H1BP16401 226 aaKnown RBP1.65□□□□□ -2.15
XRN1-206ENST00000467077 RAB4AP20338 218 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 EMP1P54849 157 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 TAS2R31P59538 309 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 PAFAH1B2P68402 229 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 HMGN3Q15651 99 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 PRSS8Q16651 343 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 VMA21Q3ZAQ7 101 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 GCSAMLQ5JQS6 135 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 C12orf73Q69YU5 71 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 GLIPR1L1Q6UWM5 242 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 NEGR1Q7Z3B1 354 aa1.65□□□□□ -2.15
XRN1-206ENST00000467077 DHFR2Q86XF0 187 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms