RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ZNF502Q8TBZ5 544 aa14.42□□□□□ -0.1
SNAPC3-205ENST00000467062 FAM167A-AS1Q96KT0 104 aa14.42□□□□□ -0.1
SNAPC3-205ENST00000467062 SLC25A2Q9BXI2 301 aa14.42□□□□□ -0.1
SNAPC3-205ENST00000467062 THBDP07204 575 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 NMUP48645 174 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 ATP5G2Q06055 141 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 LYPD2Q6UXB3 125 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 C8orf86Q6ZUL3 223 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 RPUSD1Q9UJJ7 312 aaKnown RBP14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 ABCA1O95477 2261 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 E7EUB6 86 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 ARPC1AQ92747 370 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 GPR82Q96P67 336 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 IGF2RP11717 2491 aa14.41□□□□□ -0.1
SNAPC3-205ENST00000467062 HAX1O00165 279 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 PRRG2O14669 202 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 TM4SF20Q53R12 229 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 DAZAP1Q96EP5 407 aaKnown RBP14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 MRPL20Q9BYC9 149 aaKnown RBP14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 ZNF492Q9P255 531 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 HIGD1BQ9P298 99 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 FOXA2Q9Y261 457 aaPredicted RBP14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 F11RQ9Y624 299 aaKnown RBP14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 ATRXP46100 2492 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 E9PLD3 99 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 KIR2DS2P43631 304 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 FXYD2P54710 66 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 SLC25A48Q6ZT89 311 aaKnown RBP14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 ERG28Q9UKR5 140 aa14.4□□□□□ -0.1
SNAPC3-205ENST00000467062 C17orf100A8MU93 164 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 SAA1P0DJI8 122 aaPredicted RBP14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 PCP2Q8IVA1 136 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 PIP4P2Q8N4L2 257 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 PAXXQ9BUH6 204 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 PSG8Q9UQ74 426 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 TRAV5A0A0B4J249 113 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 CT45A10P0DMU9 189 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 GAGE13Q4V321 117 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 Q8NA96 180 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 PHLDA1Q8WV24 401 aaPredicted RBP14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 SS18L2Q9UHA2 77 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 NAV3Q8IVL0 2385 aa14.39□□□□□ -0.11
SNAPC3-205ENST00000467062 SLC25A17O43808 307 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 TCTAP57738 103 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 TMEM177Q53S58 311 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 PSMG4Q5JS54 123 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 C10orf55Q5SWW7 151 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 TMEM200BQ69YZ2 307 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 GFRALQ6UXV0 394 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 hADV38S2A0JD32 116 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 CACNG7P62955 275 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 OR9G1Q8NH87 305 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 C18orf15Q96N68 181 aa14.38□□□□□ -0.11
SNAPC3-205ENST00000467062 UPK2O00526 184 aa14.37□□□□□ -0.11
SNAPC3-205ENST00000467062 MLST8Q9BVC4 326 aa14.37□□□□□ -0.11
SNAPC3-205ENST00000467062 EPDR1Q9UM22 224 aa14.37□□□□□ -0.11
SNAPC3-205ENST00000467062 C19orf71A6NCJ1 209 aa14.37□□□□□ -0.11
SNAPC3-205ENST00000467062 KLF12Q9Y4X4 402 aa14.37□□□□□ -0.11
SNAPC3-205ENST00000467062 H3BMG7 143 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 K7ERJ3 54 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 TNFRSF1AP19438 455 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 TEX36Q5VZQ5 186 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 RNF183Q96D59 192 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 HARBI1Q96MB7 349 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 PTPRQQ9UMZ3 2332 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 IGHV3-72A0A0B4J1Y9 119 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 TCRBV4S1A1TA0A5B7 111 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 PYYP10082 97 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 GNG5P63218 68 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 KLRD1Q13241 179 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 C3orf36Q3SXR2 165 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 NUP37Q8NFH4 326 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 ZNF414Q96IQ9 312 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 TANC2Q9HCD6 1990 aa14.36□□□□□ -0.11
SNAPC3-205ENST00000467062 IGLL5B9A064 214 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 SLC25A5P05141 298 aaKnown RBP14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 APELAP0DMC3 54 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 GAGE5Q13069 117 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 GAGE6Q13070 117 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 MORN5Q5VZ52 161 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 LINC00322Q6ZN03 302 aaPredicted RBP14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 OR5AN1Q8NGI8 311 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 RITA1Q96K30 269 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 NHP2Q9NX24 153 aaKnown RBP14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 LINC00312Q9Y6C7 94 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 LYNX1G3V0Z9 82 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 LYNX1P0DP58 116 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 SSBP2P81877 361 aaPredicted RBP14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 PRCDQ00LT1 54 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 ZNF714Q96N38 554 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 PRNDQ9UKY0 176 aa14.35□□□□□ -0.11
SNAPC3-205ENST00000467062 MOSP00540 346 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 ATP5IP56385 69 aaPredicted RBP14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 PIFOQ8TCI5 191 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 RAB9BQ9NP90 201 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 CTSZQ9UBR2 303 aa14.34□□□□□ -0.11
SNAPC3-205ENST00000467062 NPIPB6E9PJ23 425 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms