RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 IAH1Q2TAA2 248 aaPredicted RBP13.52□□□□□ -0.25
COL9A3-206ENST00000466532 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 C15orf53Q8NAA6 179 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 OR10P1Q8NGE3 313 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 ARV1Q9H2C2 271 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 MUC4Q99102 2169 aa13.51□□□□□ -0.25
COL9A3-206ENST00000466532 AZU1P20160 251 aa13.51□□□□□ -0.25
COL9A3-206ENST00000466532 PATE2Q6UY27 113 aa13.51□□□□□ -0.25
COL9A3-206ENST00000466532 CENPXA8MT69 81 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 K7EPK0 472 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
COL9A3-206ENST00000466532 TSC22D2O75157 780 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 MED14OSP0DP75 135 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 PRB4P10163 310 aaPredicted RBP13.5□□□□□ -0.25
COL9A3-206ENST00000466532 BTCP35070 178 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 TAS2R30P59541 319 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 SOHLH1Q5JUK2 328 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 ZBTB8BQ8NAP8 495 aaPredicted RBP13.5□□□□□ -0.25
COL9A3-206ENST00000466532 LINC01587Q99440 93 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 GSKIPQ9P0R6 139 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 RNF24Q9Y225 148 aa13.5□□□□□ -0.25
COL9A3-206ENST00000466532 RCL1Q9Y2P8 373 aaKnown RBP13.5□□□□□ -0.25
COL9A3-206ENST00000466532 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 GOSR2O14653 212 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 MRPS12O15235 138 aaKnown RBP13.49□□□□□ -0.25
COL9A3-206ENST00000466532 FCN2Q15485 313 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 PXDC1Q5TGL8 231 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 RPUSD4Q96CM3 377 aaKnown RBP13.49□□□□□ -0.25
COL9A3-206ENST00000466532 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
COL9A3-206ENST00000466532 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
COL9A3-206ENST00000466532 F5H768 121 aa13.48□□□□□ -0.25
COL9A3-206ENST00000466532 LINC00305Q7Z4B0 112 aa13.48□□□□□ -0.25
COL9A3-206ENST00000466532 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
COL9A3-206ENST00000466532 AGPAT2O15120 278 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 SNRPCP09234 159 aaKnown RBP13.47□□□□□ -0.25
COL9A3-206ENST00000466532 HTN1P15515 57 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 CXCL2P19875 107 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 CDKN1BP46527 198 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 FAM3BP58499 235 aaPredicted RBP13.47□□□□□ -0.25
COL9A3-206ENST00000466532 TAS2R60P59551 318 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 C1orf134Q5TEV5 83 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 LCN15Q6UWW0 184 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 MITD1Q8WV92 249 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 C16orf74Q96GX8 76 aa13.47□□□□□ -0.25
COL9A3-206ENST00000466532 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
COL9A3-206ENST00000466532 C7orf66A4D0T2 115 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 NUDT3O95989 172 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 ATP5G1P05496 136 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 IL7P13232 177 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 ATP5G3P48201 142 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
COL9A3-206ENST00000466532 CBY3A6NI87 242 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 MBPP02686 304 aaPredicted RBP13.45□□□□□ -0.26
COL9A3-206ENST00000466532 CNPY1Q3B7I2 92 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 BPIFA4PQ86YQ2 179 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 MGST2Q99735 147 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 GGACTQ9BVM4 153 aa13.45□□□□□ -0.26
COL9A3-206ENST00000466532 TIMM8BQ9Y5J9 83 aaPredicted RBP13.45□□□□□ -0.26
COL9A3-206ENST00000466532 L7N2F9 121 aa13.44□□□□□ -0.26
COL9A3-206ENST00000466532 CCSO14618 274 aa13.44□□□□□ -0.26
COL9A3-206ENST00000466532 VAMP2P63027 116 aa13.44□□□□□ -0.26
COL9A3-206ENST00000466532 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
COL9A3-206ENST00000466532 C20orf85Q9H1P6 137 aa13.44□□□□□ -0.26
COL9A3-206ENST00000466532 RYR1P21817 5038 aa13.43□□□□□ -0.26
COL9A3-206ENST00000466532 H3BTX0 84 aa13.43□□□□□ -0.26
COL9A3-206ENST00000466532 ZNF846Q147U1 533 aa13.43□□□□□ -0.26
COL9A3-206ENST00000466532 C10orf113Q5VZT2 155 aa13.43□□□□□ -0.26
COL9A3-206ENST00000466532 ZNF493Q6ZR52 646 aa13.43□□□□□ -0.26
COL9A3-206ENST00000466532 TMEM263Q8WUH6 116 aaKnown RBP13.43□□□□□ -0.26
COL9A3-206ENST00000466532 LSM5Q9Y4Y9 91 aaKnown RBP13.43□□□□□ -0.26
COL9A3-206ENST00000466532 H7BYZ3 331 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 SLC17A3O00476 420 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 OPCMLQ14982 345 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 MORN5Q5VZ52 161 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 RNASE8Q8TDE3 154 aaKnown RBP13.42□□□□□ -0.26
COL9A3-206ENST00000466532 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
COL9A3-206ENST00000466532 PARD6GQ9BYG4 376 aaPredicted RBP13.42□□□□□ -0.26
COL9A3-206ENST00000466532 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
COL9A3-206ENST00000466532 FAM25EA8MYX2 175 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 PRAC2D3DTV9 90 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 CAMLGP49069 296 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 BCAP31P51572 246 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 ZNF575Q86XF7 245 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 RNF141Q8WVD5 230 aa13.41□□□□□ -0.26
COL9A3-206ENST00000466532 NBDYA0A0U1RRE5 68 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 PLA2G10O15496 165 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 IGLC2P0DOY2 106 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 CAV2P51636 162 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 CCL18P55774 89 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 RAB31Q13636 194 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 Q6ZRG5 221 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 NRARPQ7Z6K4 114 aa13.4□□□□□ -0.26
COL9A3-206ENST00000466532 PXMP4Q9Y6I8 212 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms