RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 IGSF23A1L1A6 192 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 PGPEP1LA6NFU8 196 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 FAM24AA6NFZ4 105 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 GAGE10A6NGK3 116 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 ZFP92A6NM28 416 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 FAM25EA8MYX2 175 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 K7EPK0 472 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 DNASE2O00115 360 aaPredicted RBP3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 SOCS3O14543 225 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 MED6O75586 246 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 IFNA21P01568 189 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 C4BPBP20851 252 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 EIF2B2P49770 351 aaKnown RBP3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 RAB11AP62491 216 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 RPP30P78346 268 aaKnown RBP3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 GDF5OSQ5U4N7 250 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 ETFRF1Q6IPR1 90 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 PATE2Q6UY27 113 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 SIGLEC15Q6ZMC9 328 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 RNF183Q96D59 192 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 SLC35E1Q96K37 410 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 DOK5Q9P104 306 aa3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 LSM5Q9Y4Y9 91 aaKnown RBP3.48□□□□□ -1.85
EXOSC3-204ENST00000465860 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 TRAV2A0A0B4J234 112 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 A0A0J9YWU9 116 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SMCO3A2RU48 225 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 C5orf51A6NDU8 294 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SNRPGP15A8MWD9 76 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 F6UB75 175 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 INMT-MINDY4F8WBC2 141 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 C3orf84H3BNL1 204 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 DEFB4AO15263 64 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CST7O76096 145 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SCGB1D1O95968 90 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CA1P00915 261 aaPredicted RBP3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 IL5P05113 134 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SNRPCP09234 159 aaKnown RBP3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 LINC00869P0C866 280 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 LYL1P12980 280 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 ORM2P19652 201 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 AMTP48728 403 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 ATP5IP56385 69 aaPredicted RBP3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 H2BFSP57053 126 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 DLK1P80370 383 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 AKR1C1Q04828 323 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SLC38A11Q08AI6 406 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 PSMG4Q5JS54 123 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CYP2G1PQ6ZSU1 146 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 TMEM144Q7Z5S9 345 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 TRPT1Q86TN4 253 aaKnown RBP3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 NOXA1Q86UR1 476 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CSNK1G2-AS1Q8NCQ2 148 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 C2orf50Q96LR7 162 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 UHRF2Q96PU4 802 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CIB3Q96Q77 187 aaPredicted RBP3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 RAB40CQ96S21 281 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 MGST2Q99735 147 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 MARVELD1Q9BSK0 173 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 SCRT1Q9BWW7 348 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 NRN1Q9NPD7 142 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 CLEC5AQ9NY25 188 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 OR5AC2Q9NZP5 309 aa3.47□□□□□ -1.85
EXOSC3-204ENST00000465860 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 TRAV8-2A0A0B4J237 113 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 KIR2DL5BA0A0G2JN68 375 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 KIR2DL5BA0A0G2JPC4 375 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 A0A1W2PS18 150 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 HELTA6NFD8 242 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF98A6NK75 572 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 H3BRN7 92 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 GOSR2O14653 212 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 MRPS12O15235 138 aaKnown RBP3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 SSNA1O43805 119 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 TSC22D2O75157 780 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 SCGB2A1O75556 95 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 CD5P06127 495 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF705DP0CH99 300 aaPredicted RBP3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF705BP0CI00 300 aaPredicted RBP3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 APOC4P55056 127 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 FXYD7P58549 80 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 TAS2R30P59541 319 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 S100A10P60903 97 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 PAFAH1B2P68402 229 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 ACTL10Q5JWF8 245 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 KIR2DL5AQ8N109 375 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 RNF182Q8N6D2 247 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 BPIFCQ8NFQ6 507 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 OR1B1Q8NGR6 318 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 KIR2DL5BQ8NHK3 375 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 TMEM37Q8WXS4 190 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 GRAMD2BQ96HH9 432 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 RNF126Q9BV68 326 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 SLC25A39Q9BZJ4 359 aaPredicted RBP3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 CSTL1Q9H114 145 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 TMEM231Q9H6L2 316 aa3.46□□□□□ -1.86
EXOSC3-204ENST00000465860 SLC25A22Q9H936 323 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms