RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IGLC2P0DOY2 106 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 MEOX2P50222 304 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 Q6ZWC4 215 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 HSD17B11Q8NBQ5 300 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 INO80EQ8NBZ0 244 aaPredicted RBP8.53□□□□□ -1.04
CUX1-207ENST00000465461 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 GATAD1Q8WUU5 269 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 RNF183Q96D59 192 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 SLC25A2Q9BXI2 301 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
CUX1-207ENST00000465461 hCG_2014768A0A024R1R8 64 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 ZNF705FA8MVS1 300 aaPredicted RBP8.52□□□□□ -1.05
CUX1-207ENST00000465461 HLA-DRB4P13762 266 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 Q6ZNX1 250 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 FOXI2Q6ZQN5 318 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 ZNF738Q8NE65 137 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 OR11H4Q8NGC9 324 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 FAM167A-AS1Q96KT0 104 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 PARD6GQ9BYG4 376 aaPredicted RBP8.52□□□□□ -1.05
CUX1-207ENST00000465461 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 HLA-DRB4X5D2U9 266 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 TENM3Q9P273 2699 aa8.52□□□□□ -1.05
CUX1-207ENST00000465461 A0A0J9YX75 114 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 ATP6V0CP27449 155 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 RAB2AP61019 212 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 PSG3Q16557 428 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 RPL7L1Q6DKI1 246 aaKnown RBP8.51□□□□□ -1.05
CUX1-207ENST00000465461 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 BLNKQ8WV28 456 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
CUX1-207ENST00000465461 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 HRH4Q9H3N8 390 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 ZNF331Q9NQX6 463 aaPredicted RBP8.51□□□□□ -1.05
CUX1-207ENST00000465461 KCNIP2Q9NS61 270 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 RNF24Q9Y225 148 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 FUT9Q9Y231 359 aa8.51□□□□□ -1.05
CUX1-207ENST00000465461 A0A0J9YWU9 116 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 PRAC2D3DTV9 90 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 DEFB4AO15263 64 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 HMGB3O15347 200 aaKnown RBP8.5□□□□□ -1.05
CUX1-207ENST00000465461 OR10J4P0C629 311 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 SPP1P10451 314 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 ZNF266Q14584 549 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 SAMD13Q5VXD3 122 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 MORN3Q6PF18 240 aaPredicted RBP8.5□□□□□ -1.05
CUX1-207ENST00000465461 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 ZNF503Q96F45 646 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 MFFQ9GZY8 342 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 OR51M1Q9H341 326 aa8.5□□□□□ -1.05
CUX1-207ENST00000465461 TRBV19A0A075B6N1 114 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 NDUFB4O95168 129 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 CNN1P51911 297 aaKnown RBP8.49□□□□□ -1.05
CUX1-207ENST00000465461 HIST1H1AQ02539 215 aaPredicted RBP8.49□□□□□ -1.05
CUX1-207ENST00000465461 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 EXOC3-AS1Q8N2X6 119 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 RPUSD4Q96CM3 377 aaKnown RBP8.49□□□□□ -1.05
CUX1-207ENST00000465461 ST6GAL2Q96JF0 529 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 RARRES2Q99969 163 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 MRPL32Q9BYC8 188 aaKnown RBP8.49□□□□□ -1.05
CUX1-207ENST00000465461 CYTL1Q9NRR1 136 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 TMEM14CQ9P0S9 112 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 TIMM9Q9Y5J7 89 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 NBEAL2Q6ZNJ1 2754 aa8.49□□□□□ -1.05
CUX1-207ENST00000465461 OR7C2O60412 319 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
CUX1-207ENST00000465461 CXCL2P19875 107 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 PSG9Q00887 426 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 ACOT6Q3I5F7 207 aaPredicted RBP8.48□□□□□ -1.05
CUX1-207ENST00000465461 ZFAND6Q6FIF0 208 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 OR8A1Q8NGG7 326 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 OR10G4Q8NGN3 311 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 OR10G9Q8NGN4 311 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 OR10G7Q8NGN6 311 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 FXYD5Q96DB9 178 aa8.48□□□□□ -1.05
CUX1-207ENST00000465461 IGHV3OR16-12A0A075B7B8 117 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 BORCS7-ASMTA0A0B4J1R7 106 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 A0A1B0GVG6 124 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 A0A1W2PPV4 95 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 M0R3E3 92 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 M6PRP20645 277 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
CUX1-207ENST00000465461 RHOBP62745 196 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 GUK1Q16774 197 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 AMTNQ6UX39 209 aa8.47□□□□□ -1.05
CUX1-207ENST00000465461 TRAV12-2A0A075B6T6 113 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 M0R2Z0 102 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.06
CUX1-207ENST00000465461 ICAM4Q14773 271 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 KCNRGQ8N5I3 272 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms