RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 RNF141Q8WVD5 230 aa10.98□□□□□ -0.65
HLA-F-223ENST00000465459 PRR25Q96S07 402 aa10.98□□□□□ -0.65
HLA-F-223ENST00000465459 SLC50A1Q9BRV3 221 aa10.98□□□□□ -0.65
HLA-F-223ENST00000465459 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
HLA-F-223ENST00000465459 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 OR11H12B2RN74 326 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 H3BQ15 152 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 CXorf1O96002 111 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 NBEAP1P0C6P0 100 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 PYYP10082 97 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 Q8N1Y9 231 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 LRRC20Q8TCA0 184 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 FXYD5Q96DB9 178 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 SAT2Q96F10 170 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-223ENST00000465459 ZNF503Q96F45 646 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 ZNF331Q9NQX6 463 aaPredicted RBP10.97□□□□□ -0.65
HLA-F-223ENST00000465459 C19orf73Q9NVV2 129 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 ZNF586Q9NXT0 402 aa10.97□□□□□ -0.65
HLA-F-223ENST00000465459 CD7P09564 240 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
HLA-F-223ENST00000465459 PSG9Q00887 426 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 ZNF726P1Q15940 193 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 FAM213BQ8TBF2 198 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 MBD3L1Q8WWY6 194 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
HLA-F-223ENST00000465459 AURKAIP1Q9NWT8 199 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-223ENST00000465459 OR10J4P0C629 311 aa10.95□□□□□ -0.66
HLA-F-223ENST00000465459 ZNF688P0C7X2 276 aa10.95□□□□□ -0.66
HLA-F-223ENST00000465459 ARL14EPLP0DKL9 152 aa10.95□□□□□ -0.66
HLA-F-223ENST00000465459 SUN5Q8TC36 379 aa10.95□□□□□ -0.66
HLA-F-223ENST00000465459 MAP1LC3B2A6NCE7 125 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 HMGB3O15347 200 aaKnown RBP10.94□□□□□ -0.66
HLA-F-223ENST00000465459 GCHFRP30047 84 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 FHITP49789 147 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 PSMG4Q5JS54 123 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 SSX7Q7RTT5 188 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 FAM24BQ8N5W8 94 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
HLA-F-223ENST00000465459 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 A8MZ25 164 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 NDUFB4O95168 129 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 H2AFB1P0C5Y9 115 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 DEFB131AP59861 70 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 PSG3Q16557 428 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 ALKAL2Q6UX46 152 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 SFT2D1Q8WV19 159 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
HLA-F-223ENST00000465459 AAMDCQ9H7C9 122 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 PRELID1Q9Y255 219 aa10.93□□□□□ -0.66
HLA-F-223ENST00000465459 SLC17A3O00476 420 aa10.92□□□□□ -0.66
HLA-F-223ENST00000465459 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
HLA-F-223ENST00000465459 HBE1P02100 147 aa10.92□□□□□ -0.66
HLA-F-223ENST00000465459 TEX261Q6UWH6 196 aa10.92□□□□□ -0.66
HLA-F-223ENST00000465459 LINC00052Q96N35 136 aa10.92□□□□□ -0.66
HLA-F-223ENST00000465459 UBQLN2Q9UHD9 624 aa10.92□□□□□ -0.66
HLA-F-223ENST00000465459 H3BTX0 84 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 K7EIL1 84 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 SNRPCP09234 159 aaKnown RBP10.91□□□□□ -0.66
HLA-F-223ENST00000465459 BLOC1S1P78537 153 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 FAM74A1Q5RGS3 127 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 FOXI2Q6ZQN5 318 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 DEFB125Q8N687 156 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 ARL6IP6Q8N6S5 226 aa10.91□□□□□ -0.66
HLA-F-223ENST00000465459 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
HLA-F-223ENST00000465459 IFNA7P01567 189 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 PRB2P02812 416 aaPredicted RBP10.9□□□□□ -0.66
HLA-F-223ENST00000465459 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 PPT1P50897 306 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 RANP62826 216 aaKnown RBP10.9□□□□□ -0.66
HLA-F-223ENST00000465459 APRG1Q8IVJ8 170 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 RNF182Q8N6D2 247 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 ZNF738Q8NE65 137 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 ZNF680Q8NEM1 530 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 C20orf173Q96LM9 149 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
HLA-F-223ENST00000465459 TUBA4BQ9H853 241 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 OTORQ9NRC9 128 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
HLA-F-223ENST00000465459 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
HLA-F-223ENST00000465459 DEFA6Q01524 100 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 PMS2P11Q13670 270 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 ICAM4Q14773 271 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 EBLN2Q6P2I7 272 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 RPUSD4Q96CM3 377 aaKnown RBP10.89□□□□□ -0.67
HLA-F-223ENST00000465459 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 WFDC10AQ9H1F0 79 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 Q9H3A6 140 aa10.89□□□□□ -0.67
HLA-F-223ENST00000465459 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
HLA-F-223ENST00000465459 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms