RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 RHOBP62745 196 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 STHQ8IWL8 128 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 STOML3Q8TAV4 291 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 OVOL2Q9BRP0 275 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 FUT9Q9Y231 359 aa12.54□□□□□ -0.4
VPS52-215ENST00000464425 TRAV5A0A0B4J249 113 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 UBE2CO00762 179 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
VPS52-215ENST00000464425 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 Q6ZWC4 215 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 BAP18Q8IXM2 172 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
VPS52-215ENST00000464425 A0A087X0K7 114 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 SPRY2O43597 315 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
VPS52-215ENST00000464425 ATF4P18848 351 aaPredicted RBP12.52□□□□□ -0.41
VPS52-215ENST00000464425 RAB2AP61019 212 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 C17orf77Q96MU5 243 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 AGRNO00468 2067 aa12.52□□□□□ -0.41
VPS52-215ENST00000464425 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 SOCS3O14543 225 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 TAS2R45P59539 299 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 TMEM41BQ5BJD5 291 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 SLC51BQ86UW2 128 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
VPS52-215ENST00000464425 SLC25A2Q9BXI2 301 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 HRH4Q9H3N8 390 aa12.51□□□□□ -0.41
VPS52-215ENST00000464425 ISLRO14498 428 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 ID1P41134 155 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 GUK1Q16774 197 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
VPS52-215ENST00000464425 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 RNF183Q96D59 192 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 RPRMQ9NS64 109 aa12.5□□□□□ -0.41
VPS52-215ENST00000464425 CA1P00915 261 aaPredicted RBP12.49□□□□□ -0.41
VPS52-215ENST00000464425 HIST1H1EP10412 219 aaKnown RBP12.49□□□□□ -0.41
VPS52-215ENST00000464425 PSMB3P49720 205 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 NKX2-5P52952 324 aaPredicted RBP12.49□□□□□ -0.41
VPS52-215ENST00000464425 DEFB1P60022 68 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 KHDC3LQ587J8 217 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 AKR1C8PQ5T2L2 129 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
VPS52-215ENST00000464425 C16orf92Q96LL3 132 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
VPS52-215ENST00000464425 OR51M1Q9H341 326 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 TP53TG1Q9Y2A0 90 aa12.49□□□□□ -0.41
VPS52-215ENST00000464425 UMAD1C9J7I0 102 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 H3BQ15 152 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 CDC34P49427 236 aaPredicted RBP12.48□□□□□ -0.41
VPS52-215ENST00000464425 FAM122CQ6P4D5 195 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 PAXXQ9BUH6 204 aa12.48□□□□□ -0.41
VPS52-215ENST00000464425 C3orf84H3BNL1 204 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 ZNF253O75346 499 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 PDE6HQ13956 83 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 RAB24Q969Q5 203 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 SAT2Q96F10 170 aaPredicted RBP12.47□□□□□ -0.41
VPS52-215ENST00000464425 ZNF586Q9NXT0 402 aa12.47□□□□□ -0.41
VPS52-215ENST00000464425 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 TRBV19A0A075B6N1 114 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 OR7C2O60412 319 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 GIG44P09565 113 aaPredicted RBP12.46□□□□□ -0.41
VPS52-215ENST00000464425 STAG3L2P0CL84 134 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 STAG3L3P0CL85 134 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 PYYP10082 97 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 GDF5OSQ5U4N7 250 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 DPPA3Q6W0C5 159 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 LRRC20Q8TCA0 184 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 RNF141Q8WVD5 230 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 ZNF503Q96F45 646 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 C20orf173Q96LM9 149 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 SLC50A1Q9BRV3 221 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 ZNF331Q9NQX6 463 aaPredicted RBP12.46□□□□□ -0.41
VPS52-215ENST00000464425 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
VPS52-215ENST00000464425 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
VPS52-215ENST00000464425 H3BMM0 161 aa12.45□□□□□ -0.42
VPS52-215ENST00000464425 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
VPS52-215ENST00000464425 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
VPS52-215ENST00000464425 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
VPS52-215ENST00000464425 TMED6Q8WW62 240 aa12.45□□□□□ -0.42
VPS52-215ENST00000464425 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms