RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 C17orf58Q2M2W7 97 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 HCP5Q6MZN7 132 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 Q8N8P6 123 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 LINC00312Q9Y6C7 94 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 KIAA0100Q14667 2235 aaKnown RBP3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TRBV19A0A075B6N1 114 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TRAV8-2A0A0B4J237 113 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TRAV40A0A0B4J280 105 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 SPAARA0A1B0GVQ0 90 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 FABP5P3A8MUU1 101 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TFF1P04155 84 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 IFITM1P13164 125 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 RPL7P18124 248 aaKnown RBP3.09□□□□□ -1.91
CCNL1-204ENST00000464316 IGHV1-2P23083 117 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 LAGE3Q14657 143 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 PVRIGQ6DKI7 326 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 EXOC3-AS1Q8N2X6 119 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 MRPL20Q9BYC9 149 aaKnown RBP3.09□□□□□ -1.91
CCNL1-204ENST00000464316 RAB1BQ9H0U4 201 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM213A2RRL7 107 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 CNIH1O95406 144 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 TNFRSF6BO95407 300 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 NPYP01303 97 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 CGB3P0DN86 165 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 CGB7P0DN87 165 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 TNFAIP6P98066 277 aaPredicted RBP3.09□□□□□ -1.92
CCNL1-204ENST00000464316 WT1-ASQ06250 92 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 ORMDL2Q53FV1 153 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF833PQ6ZTB9 187 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 OR11H6Q8NGC7 330 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 SAP25Q8TEE9 199 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 WFDC12Q8WWY7 111 aa3.09□□□□□ -1.92
CCNL1-204ENST00000464316 LRP4O75096 1905 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 MED12LQ86YW9 2145 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 A0A087WX48 190 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 TRBV7-9A0A0J9YWB2 115 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PRSS29PA6NIE9 313 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 KLK10O43240 276 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 NDUFB3O43676 98 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 NDUFA3O95167 84 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV3-15P01624 115 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 CRYGCP07315 174 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 CECR9P0C854 216 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 CCL11P51671 97 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 FXYD7P58549 80 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PEAR1Q5VY43 1037 aaPredicted RBP3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PHLDA1Q8WV24 401 aaPredicted RBP3.08□□□□□ -1.92
CCNL1-204ENST00000464316 FBXL15Q9H469 300 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 ZMAT4Q9H898 229 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 FSCN3Q9NQT6 498 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 SPANXCQ9NY87 97 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 DNAH12Q6ZR08 3092 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV1D-37A0A075B6S9 117 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 F8VRH5 84 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 LAMTOR5O43504 91 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 SH2D1AO60880 128 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 AGFG2O95081 481 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PPP1R17O96001 155 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 FAM106CPP0CH98 169 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 LOXL1Q08397 574 aaPredicted RBP3.08□□□□□ -1.92
CCNL1-204ENST00000464316 FAM106AQ4KMX7 169 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 SCGB3A1Q96QR1 104 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 CCL13Q99616 98 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 ASCL2Q99929 193 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 SHANK2-AS3Q9BTD1 123 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 MRPL35Q9NZE8 188 aaKnown RBP3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PROCRQ9UNN8 238 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 HHLA3Q9XRX5 114 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF815PA8K554 130 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 GLRXP35754 106 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 CFAP126Q5VTH2 177 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 ASCL5Q7RTU5 278 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 PPP1R27Q86WC6 154 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 OR10J6PQ8NGY7 276 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 LINC00574Q9H8X3 128 aa3.08□□□□□ -1.92
CCNL1-204ENST00000464316 A0A096LNJ9 63 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 K7EMI3 77 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 FCN3O75636 299 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 CEACAM4O75871 244 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 COX6CP09669 75 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 PPIFP30405 207 aaKnown RBP3.07□□□□□ -1.92
CCNL1-204ENST00000464316 RPL13AP40429 203 aaKnown RBP3.07□□□□□ -1.92
CCNL1-204ENST00000464316 Q0VFX4 171 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 Q1RN00 199 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM78Q5T7P6 136 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 SMIM20Q8N5G0 67 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 FAM110AQ9BQ89 295 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 SRSF8Q9BRL6 282 aaKnown RBP3.07□□□□□ -1.92
CCNL1-204ENST00000464316 C2orf16Q68DN1 1984 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 PCDH15Q96QU1 1955 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 IGKV2D-26A0A0A0MRZ7 120 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 TRAV12-1A0A0B4J245 112 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 A0A1W2PPI3 338 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 SMKR1H3BMG3 65 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 HERV-K104P63124 156 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 SRSF2Q01130 221 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms