RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MBD2Q9UBB5 411 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 A0A0J9YX75 114 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 C17orf112F2Z3M2 114 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 DUSP14O95147 198 aaKnown RBP9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 C4BPBP20851 252 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 RPL12P30050 165 aaKnown RBP9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 ZNF709Q8N972 641 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 OR11H2Q8NH07 326 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 WDR61Q9GZS3 305 aaKnown RBP9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 AGRNO00468 2067 aa9.54□□□□□ -0.88
R3HDM1-213ENST00000463230 GHRHP01286 108 aa9.53□□□□□ -0.88
R3HDM1-213ENST00000463230 AMBPP02760 352 aa9.53□□□□□ -0.88
R3HDM1-213ENST00000463230 GIPP09681 153 aaPredicted RBP9.53□□□□□ -0.88
R3HDM1-213ENST00000463230 DNAH7Q8WXX0 4024 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 TRAV8-2A0A0B4J237 113 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 A0A0J9YWU9 116 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 ZNF705EA8MWA4 302 aaPredicted RBP9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 ZNF253O75346 499 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 MIFP14174 115 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 CXCL3P19876 107 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 CLINT1Q14677 625 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 FCN2Q15485 313 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 C20orf173Q96LM9 149 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 HRH4Q9H3N8 390 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 TMEM14CQ9P0S9 112 aa9.52□□□□□ -0.88
R3HDM1-213ENST00000463230 IFNA5P01569 189 aa9.52□□□□□ -0.89
R3HDM1-213ENST00000463230 PSG9Q00887 426 aa9.52□□□□□ -0.89
R3HDM1-213ENST00000463230 OR11H7Q8NGC8 314 aa9.52□□□□□ -0.89
R3HDM1-213ENST00000463230 LRRC20Q8TCA0 184 aa9.52□□□□□ -0.89
R3HDM1-213ENST00000463230 IGLC2P0DOY2 106 aa9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 PSG3Q16557 428 aa9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 MRPL32Q9BYC8 188 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 GDF5OSQ5U4N7 250 aa9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 SCGB1C1Q8TD33 95 aa9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 NEU1Q99519 415 aa9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 MFFQ9GZY8 342 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 PDE6HQ13956 83 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 FAM78BQ5VT40 261 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 MORN5Q5VZ52 161 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 MRPL53Q96EL3 112 aaKnown RBP9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 AQP10Q96PS8 301 aa9.5□□□□□ -0.89
R3HDM1-213ENST00000463230 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
R3HDM1-213ENST00000463230 Q8NAQ8 132 aa9.49□□□□□ -0.89
R3HDM1-213ENST00000463230 OR4B1Q8NGF8 309 aa9.49□□□□□ -0.89
R3HDM1-213ENST00000463230 HIST1H1EP10412 219 aaKnown RBP9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF705AQ6ZN79 300 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 PRELID1Q9Y255 219 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 X6R8D5 127 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF266Q14584 549 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 F6UB75 175 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF705DP0CH99 300 aaPredicted RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF705BP0CI00 300 aaPredicted RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 CNN1P51911 297 aaKnown RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 DEFB1P60022 68 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 H3BQ15 152 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 IGKV3-20P01619 116 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 IGF2BP2-AS1Q96M15 143 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 FUT9Q9Y231 359 aa9.47□□□□□ -0.89
R3HDM1-213ENST00000463230 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 FFAR4Q5NUL3 377 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 AKAP14Q86UN6 197 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 SLC35B3Q9H1N7 401 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.89
R3HDM1-213ENST00000463230 RHOBP62745 196 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 C11orf45Q8TAV5 145 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 ODF3Q96PU9 254 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 WFDC1Q9HC57 220 aa9.46□□□□□ -0.9
R3HDM1-213ENST00000463230 CXorf65A6NEN9 183 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 SLC17A3O00476 420 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 INSP01308 110 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 TAS2R45P59539 299 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 ACOT6Q3I5F7 207 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 OR10J6PQ8NGY7 276 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
R3HDM1-213ENST00000463230 RFNGQ9Y644 331 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms