RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 SLC25A2Q9BXI2 301 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 KCNIP2Q9NS61 270 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 HLA-DRB4P13762 266 aa12.19□□□□□ -0.46
HLA-DPA1-245ENST00000463066 FXYD7P58549 80 aa12.19□□□□□ -0.46
HLA-DPA1-245ENST00000463066 RPL7L1Q6DKI1 246 aaKnown RBP12.19□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SAV1Q9H4B6 383 aaPredicted RBP12.19□□□□□ -0.46
HLA-DPA1-245ENST00000463066 HLA-DRB4X5D2U9 266 aa12.19□□□□□ -0.46
HLA-DPA1-245ENST00000463066 UBE2CO00762 179 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SPRY2O43597 315 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ATP6V0CP27449 155 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 RAB2AP61019 212 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 FOXI2Q6ZQN5 318 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 Q6ZWC4 215 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 RNF183Q96D59 192 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SH3BGRL3Q9H299 93 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 CLEC5AQ9NY25 188 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 FUT9Q9Y231 359 aa12.18□□□□□ -0.46
HLA-DPA1-245ENST00000463066 A0A0J9YX75 114 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF705FA8MVS1 300 aaPredicted RBP12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 PSG3Q16557 428 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SAMD13Q5VXD3 122 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 OR4B1Q8NGF8 309 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 MFFQ9GZY8 342 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 HRH4Q9H3N8 390 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 EDA2RQ9HAV5 297 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 TMEM14CQ9P0S9 112 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 RNF24Q9Y225 148 aa12.17□□□□□ -0.46
HLA-DPA1-245ENST00000463066 PRAC2D3DTV9 90 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF266Q14584 549 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 CYTL1Q9NRR1 136 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 TIMM9Q9Y5J7 89 aa12.16□□□□□ -0.46
HLA-DPA1-245ENST00000463066 NDUFB4O95168 129 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 OR10J4P0C629 311 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 SPP1P10451 314 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 FAM122CQ6P4D5 195 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 MORN3Q6PF18 240 aaPredicted RBP12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 BLNKQ8WV28 456 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 MRPL32Q9BYC8 188 aaKnown RBP12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
HLA-DPA1-245ENST00000463066 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 A0A1B0GVG6 124 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 CXCL2P19875 107 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 CNN1P51911 297 aaKnown RBP12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 FXYD5Q96DB9 178 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 SLC50A1Q9BRV3 221 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR51M1Q9H341 326 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
HLA-DPA1-245ENST00000463066 HMGB3O15347 200 aaKnown RBP12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 M6PRP20645 277 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 RHOBP62745 196 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 ACOT6Q3I5F7 207 aaPredicted RBP12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 AMTNQ6UX39 209 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR10G4Q8NGN3 311 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR10G9Q8NGN4 311 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR10G7Q8NGN6 311 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 PAXXQ9BUH6 204 aa12.13□□□□□ -0.47
HLA-DPA1-245ENST00000463066 BORCS7-ASMTA0A0B4J1R7 106 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 A8MTW9 85 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 M0R3E3 92 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR7C2O60412 319 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 CD300CQ08708 224 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 GUK1Q16774 197 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 KCNRGQ8N5I3 272 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 OR11H2Q8NH07 326 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 RNF141Q8WVD5 230 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 PHYHIPLQ96FC7 376 aa12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 PSMG3Q9BT73 122 aaPredicted RBP12.12□□□□□ -0.47
HLA-DPA1-245ENST00000463066 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 DEFB4AO15263 64 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 NBEAP1P0C6P0 100 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 PSG9Q00887 426 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 RARRES2Q99969 163 aa12.11□□□□□ -0.47
HLA-DPA1-245ENST00000463066 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
HLA-DPA1-245ENST00000463066 M0R2Z0 102 aa12.1□□□□□ -0.47
HLA-DPA1-245ENST00000463066 UBE2L3P68036 154 aaKnown RBP12.1□□□□□ -0.47
HLA-DPA1-245ENST00000463066 SSX7Q7RTT5 188 aa12.1□□□□□ -0.47
HLA-DPA1-245ENST00000463066 A0A1W2PPV4 95 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 ZNF253O75346 499 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms