RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FAM231AP0DMU4 169 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 FAM231CP0DMU5 169 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 CXCL3P19876 107 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 CNN1P51911 297 aaKnown RBP6.52□□□□□ -1.37
BRCA1-207ENST00000461798 B2MP61769 119 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 RRAS2P62070 204 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-207ENST00000461798 RRN3P1Q2M238 152 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 LINC00299Q6ZSB3 139 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 OR11H7Q8NGC8 314 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 NIPSNAP3BQ9BS92 247 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 ARL6Q9H0F7 186 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 C20orf85Q9H1P6 137 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 ARV1Q9H2C2 271 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 GSKIPQ9P0R6 139 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 MGAT4CQ9UBM8 478 aa6.52□□□□□ -1.37
BRCA1-207ENST00000461798 FRAS1Q86XX4 4008 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 SCGB1D2O95969 90 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 OR5G3P0C626 314 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 CXCL2P19875 107 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 TSPOP30536 169 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 EMP1P54849 157 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 IL15RAQ13261 267 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 PSG3Q16557 428 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 IGFL4Q6B9Z1 124 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF546Q86UE3 836 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF431Q8TF32 576 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-207ENST00000461798 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 CCDC32Q9BV29 185 aa6.51□□□□□ -1.37
BRCA1-207ENST00000461798 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
BRCA1-207ENST00000461798 GOSR2O14653 212 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 AGPAT2O15120 278 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 INSP01308 110 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 FGL1Q08830 312 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 SLC38A11Q08AI6 406 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF846Q147U1 533 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 C12orf45Q8N5I9 185 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF738Q8NE65 137 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 OR8A1Q8NGG7 326 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 C2orf50Q96LR7 162 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 MGST2Q99735 147 aa6.5□□□□□ -1.37
BRCA1-207ENST00000461798 TRAV6A0A075B6T7 132 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 BOLA2-SMG1P6H3BVE0 249 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 L7N2F9 121 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 CCSO14618 274 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 VAMP2P63027 116 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 RAB31Q13636 194 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 SPINK13Q1W4C9 94 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 VWC2Q2TAL6 325 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LGALS9BQ3B8N2 356 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LCN15Q6UWW0 184 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LINC00336Q6ZUF6 198 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LINC00305Q7Z4B0 112 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 BPIFA4PQ86YQ2 179 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 LRRC20Q8TCA0 184 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 TMEM208Q9BTX3 173 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 DNAJC4Q9NNZ3 241 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF331Q9NQX6 463 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-207ENST00000461798 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
BRCA1-207ENST00000461798 PLAC8L1A1L4L8 177 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 ZNF705GA8MUZ8 300 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-207ENST00000461798 M0R2Z0 102 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 IGLC2P0DOY2 106 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 CAMLGP49069 296 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 DAD1P61803 113 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 HIST1H1AQ02539 215 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-207ENST00000461798 RNF212Q495C1 297 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 TMEM256Q8N2U0 113 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 RPUSD4Q96CM3 377 aaKnown RBP6.48□□□□□ -1.37
BRCA1-207ENST00000461798 SAT2Q96F10 170 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-207ENST00000461798 SEC22CQ9BRL7 303 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 WDR83OSQ9Y284 106 aa6.48□□□□□ -1.37
BRCA1-207ENST00000461798 FAM240BA0A1B0GVZ2 78 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 C5orf51A6NDU8 294 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 FAM24AA6NFZ4 105 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 FAM25EA8MYX2 175 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 COX7A2P2O60397 106 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 CST7O76096 145 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 PRM2P04554 102 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 AZU1P20160 251 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 PVALBP20472 110 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-207ENST00000461798 S100A11P31949 105 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 CDKN1BP46527 198 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 RPL29P47914 159 aaKnown RBP6.47□□□□□ -1.37
BRCA1-207ENST00000461798 SULT1A1P50225 295 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 BCAP31P51572 246 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 CAV2P51636 162 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 TAS2R60P59551 318 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 RHOBP62745 196 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 OPCMLQ14982 345 aa6.47□□□□□ -1.37
BRCA1-207ENST00000461798 ATP6V1FQ16864 119 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms