RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
SYN3-206ENST00000461446 HUWE1Q7Z6Z7 4374 aaKnown RBP7.58□□□□□ -1.2
SYN3-206ENST00000461446 CTXND1A0A1B0GTU2 59 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 OR4C46A6NHA9 309 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 KRBOX1C9JBD0 128 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 DNASE2O00115 360 aaPredicted RBP7.57□□□□□ -1.2
SYN3-206ENST00000461446 TFPI2P48307 235 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 CD81P60033 236 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 GCSAMLQ5JQS6 135 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 WFDC3Q8IUB2 231 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 STXBP6Q8NFX7 210 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 GPR82Q96P67 336 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
SYN3-206ENST00000461446 K7EQG2 157 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 RPL7P18124 248 aaKnown RBP7.56□□□□□ -1.2
SYN3-206ENST00000461446 GALR1P47211 349 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 MORN5Q5VZ52 161 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 FAM122CQ6P4D5 195 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 RPP25LQ8N5L8 163 aaKnown RBP7.56□□□□□ -1.2
SYN3-206ENST00000461446 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 FAM210AQ96ND0 272 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 RCHY1Q96PM5 261 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
SYN3-206ENST00000461446 STAB2Q8WWQ8 2551 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 A0A1W2PPV4 95 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 MAP1LC3B2A6NCE7 125 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 A8MZ25 164 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 OR11H12B2RN74 326 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 MRPS12O15235 138 aaKnown RBP7.55□□□□□ -1.2
SYN3-206ENST00000461446 CDC34P49427 236 aaPredicted RBP7.55□□□□□ -1.2
SYN3-206ENST00000461446 CMC4P56277 68 aaPredicted RBP7.55□□□□□ -1.2
SYN3-206ENST00000461446 PEA15Q15121 130 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 ZNF726P1Q15940 193 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 GUK1Q16774 197 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 ODF3L2Q3SX64 289 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 FAM78BQ5VT40 261 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 LCN15Q6UWW0 184 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 C17orf77Q96MU5 243 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 FAM110AQ9BQ89 295 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 MAP1LC3BQ9GZQ8 125 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 SMDT1Q9H4I9 107 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
SYN3-206ENST00000461446 TREM1Q9NP99 234 aa7.55□□□□□ -1.2
SYN3-206ENST00000461446 TRAV5A0A0B4J249 113 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 A0A1B0GV50 99 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 IFNA1P01562 189 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 MEOX2P50222 304 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 RHOBP62745 196 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 PMS2P11Q13670 270 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 HAGHQ16775 308 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 FAM24BQ8N5W8 94 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 DEFB125Q8N687 156 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 TM2D3Q9BRN9 247 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 EIF5A2Q9GZV4 153 aaKnown RBP7.54□□□□□ -1.2
SYN3-206ENST00000461446 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
SYN3-206ENST00000461446 A0A087X0K7 114 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 RBFOX3A6NFN3 312 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 SOCS3O14543 225 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 CCL20P78556 96 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 SPATA31B1PQ5VZV4 182 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 MIR17HGQ75NE6 70 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 SSX7Q7RTT5 188 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 FAM167A-AS1Q96KT0 104 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 MRPL32Q9BYC8 188 aaKnown RBP7.53□□□□□ -1.2
SYN3-206ENST00000461446 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 FUT9Q9Y231 359 aa7.53□□□□□ -1.2
SYN3-206ENST00000461446 RBMY1BA6NDE4 496 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 RBMY1EA6NEQ0 496 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 ISLRO14498 428 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 RBMY1DP0C7P1 496 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 IGLC2P0DOY2 106 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 TAGLN2P37802 199 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 PPT1P50897 306 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 FGF8P55075 233 aaPredicted RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 DEFB131AP59861 70 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
SYN3-206ENST00000461446 KHDC3LQ587J8 217 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 ZNF506Q5JVG8 444 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 APRG1Q8IVJ8 170 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 RETNQ9HD89 108 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 TMEM14CQ9P0S9 112 aa7.52□□□□□ -1.21
SYN3-206ENST00000461446 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
SYN3-206ENST00000461446 F8W036 122 aa7.51□□□□□ -1.21
SYN3-206ENST00000461446 H3BQ15 152 aa7.51□□□□□ -1.21
SYN3-206ENST00000461446 HMGB3O15347 200 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms