RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 CCDC190Q86UF4 302 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 SHANK2-AS3Q9BTD1 123 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 SLC25A39Q9BZJ4 359 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-220ENST00000461409 PSENENQ9NZ42 101 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 C9orf170A2RU37 121 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 FNDC10F2Z333 226 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 H3BRN7 92 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 M0R2Z0 102 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 RTL8CO15255 209 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 SSSCA1O60232 199 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 NDUFB6O95139 128 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 OR5G3P0C626 314 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 LINC00869P0C866 280 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 TSPOP30536 169 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-220ENST00000461409 PLP1P60201 277 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 POLR2GP62487 172 aaKnown RBP eCLIP6.16□□□□□ -1.42
HDAC9-220ENST00000461409 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
HDAC9-220ENST00000461409 FGL1Q08830 312 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 SPINK13Q1W4C9 94 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 TRIQKQ629K1 86 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM88Q6PEY1 159 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 GSG1LQ6UXU4 331 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM256Q8N2U0 113 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 RNF182Q8N6D2 247 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 OR11H7Q8NGC8 314 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 SMIM8Q96KF7 97 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 C17orf77Q96MU5 243 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 PPP1R14DQ9NXH3 145 aa6.16□□□□□ -1.42
HDAC9-220ENST00000461409 A0A087X0K7 114 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 TRAV8-2A0A0B4J237 113 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 CENPXA8MT69 81 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 BOLA2-SMG1P6H3BVE0 249 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 K7EPK0 472 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 ZNF701M0R085 212 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-220ENST00000461409 ADAP1O75689 374 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 TAS2R30P59541 319 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 DLK1P80370 383 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 C4orf46Q504U0 113 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 PXDC1Q5TGL8 231 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM182Q6ZP80 229 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-220ENST00000461409 Q6ZR54 194 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 OR10P1Q8NGE3 313 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 LRRC20Q8TCA0 184 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 SRRQ9GZT4 340 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 MGAT4CQ9UBM8 478 aa6.15□□□□□ -1.42
HDAC9-220ENST00000461409 KIAA1109Q2LD37 5005 aa6.15□□□□□ -1.43
HDAC9-220ENST00000461409 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
HDAC9-220ENST00000461409 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF705GA8MUZ8 300 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-220ENST00000461409 CRXO43186 299 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-220ENST00000461409 TSC22D2O75157 780 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 OR4E1P0C645 316 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 METTL15P1P0C7V9 234 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 CXCL2P19875 107 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 CXCL3P19876 107 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 ANXA7P20073 488 aaKnown RBP6.14□□□□□ -1.43
HDAC9-220ENST00000461409 RHOBP62745 196 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 HIST1H1AQ02539 215 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-220ENST00000461409 IAH1Q2TAA2 248 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-220ENST00000461409 IGFL4Q6B9Z1 124 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 TMEM14EPQ6UXP3 125 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF546Q86UE3 836 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 BAP18Q8IXM2 172 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 OR8A1Q8NGG7 326 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 C8orf49Q96NF6 230 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 ATG101Q9BSB4 218 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 GGACTQ9BVM4 153 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 ARL6Q9H0F7 186 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 NPVFQ9HCQ7 196 aa6.14□□□□□ -1.43
HDAC9-220ENST00000461409 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 TRAV12-2A0A075B6T6 113 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 GOSR2O14653 212 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 SCGB1D2O95969 90 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 DEFB130BP0DP73 79 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 DEFB130AP0DP74 79 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 TAS2R60P59551 318 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 RRAS2P62070 204 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-220ENST00000461409 PSG3Q16557 428 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 CNPY1Q3B7I2 92 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 C1orf134Q5TEV5 83 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 RPUSD4Q96CM3 377 aaKnown RBP6.13□□□□□ -1.43
HDAC9-220ENST00000461409 C16orf74Q96GX8 76 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 LINC01587Q99440 93 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 RBM38Q9H0Z9 239 aaKnown RBP6.13□□□□□ -1.43
HDAC9-220ENST00000461409 ARV1Q9H2C2 271 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 FLVCR2Q9UPI3 526 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 DNAH2Q9P225 4427 aa6.13□□□□□ -1.43
HDAC9-220ENST00000461409 F5H768 121 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 COX7A2P2O60397 106 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms