RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 CXCL2P19875 107 aa11.58□□□□□ -0.56
GGA1-216ENST00000460957 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
GGA1-216ENST00000460957 MBD2Q9UBB5 411 aa11.58□□□□□ -0.56
GGA1-216ENST00000460957 RHOBP62745 196 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 RGS21Q2M5E4 152 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 CLUHP3Q96NS8 147 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 ATP5SQ99766 215 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 SMIM3Q9BZL3 60 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
GGA1-216ENST00000460957 GOLT1BQ9Y3E0 138 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 HSPB11Q9Y547 144 aa11.57□□□□□ -0.56
GGA1-216ENST00000460957 TRAV8-2A0A0B4J237 113 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 IGHV4-28A0A0C4DH34 117 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 CXCL3P19876 107 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
GGA1-216ENST00000460957 PSG3Q16557 428 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 RNF126Q9BV68 326 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 WDR61Q9GZS3 305 aaKnown RBP11.56□□□□□ -0.56
GGA1-216ENST00000460957 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
GGA1-216ENST00000460957 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 ZNF705EA8MWA4 302 aaPredicted RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 H3BTX0 84 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 AMBPP02760 352 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 CNN1P51911 297 aaKnown RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 NANOS2P60321 138 aaKnown RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 GUK1Q16774 197 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 MORN5Q5VZ52 161 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 RPUSD4Q96CM3 377 aaKnown RBP11.55□□□□□ -0.56
GGA1-216ENST00000460957 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
GGA1-216ENST00000460957 HLA-DMBP28068 263 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 FCN2Q15485 313 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 Q8NAQ8 132 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 PHLDA1Q8WV24 401 aaPredicted RBP11.54□□□□□ -0.56
GGA1-216ENST00000460957 HRH4Q9H3N8 390 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
GGA1-216ENST00000460957 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
GGA1-216ENST00000460957 MRPS12O15235 138 aaKnown RBP11.53□□□□□ -0.56
GGA1-216ENST00000460957 SPINK13Q1W4C9 94 aa11.53□□□□□ -0.56
GGA1-216ENST00000460957 CEMP1Q6PRD7 247 aaPredicted RBP11.53□□□□□ -0.56
GGA1-216ENST00000460957 OR8A1Q8NGG7 326 aa11.53□□□□□ -0.56
GGA1-216ENST00000460957 X6R8D5 127 aa11.53□□□□□ -0.56
GGA1-216ENST00000460957 LCE6AA0A183 80 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 INSP01308 110 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 HBE1P02100 147 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
GGA1-216ENST00000460957 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 EMP1P54849 157 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
GGA1-216ENST00000460957 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 OR11H7Q8NGC8 314 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
GGA1-216ENST00000460957 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 H3BQ15 152 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 BOLA2-SMG1P6H3BVE0 249 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 M0R2Z0 102 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 SLC17A3O00476 420 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 IGLC2P0DOY2 106 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 HIST1H1EP10412 219 aaKnown RBP11.51□□□□□ -0.57
GGA1-216ENST00000460957 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 MRPL32Q9BYC8 188 aaKnown RBP11.51□□□□□ -0.57
GGA1-216ENST00000460957 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 RFNGQ9Y644 331 aa11.51□□□□□ -0.57
GGA1-216ENST00000460957 ZNF705FA8MVS1 300 aaPredicted RBP11.5□□□□□ -0.57
GGA1-216ENST00000460957 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
GGA1-216ENST00000460957 RRN3P1Q2M238 152 aa11.5□□□□□ -0.57
GGA1-216ENST00000460957 ZNF705AQ6ZN79 300 aaPredicted RBP11.5□□□□□ -0.57
GGA1-216ENST00000460957 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
GGA1-216ENST00000460957 NEU1Q99519 415 aa11.5□□□□□ -0.57
GGA1-216ENST00000460957 ZNF586Q9NXT0 402 aa11.5□□□□□ -0.57
GGA1-216ENST00000460957 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
GGA1-216ENST00000460957 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 OR7C2O60412 319 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 ZNF253O75346 499 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
GGA1-216ENST00000460957 PYYP10082 97 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 ZNF266Q14584 549 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 INO80EQ8NBZ0 244 aaPredicted RBP11.49□□□□□ -0.57
GGA1-216ENST00000460957 OR51M1Q9H341 326 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 FUT9Q9Y231 359 aa11.49□□□□□ -0.57
GGA1-216ENST00000460957 TRBV19A0A075B6N1 114 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 A8MTW9 85 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 TSPOP30536 169 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 TAS2R45P59539 299 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
GGA1-216ENST00000460957 AMTNQ6UX39 209 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 C2CD4CQ8TF44 421 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
GGA1-216ENST00000460957 PAXXQ9BUH6 204 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 SLC25A2Q9BXI2 301 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms