RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 IGFL4Q6B9Z1 124 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 RNF182Q8N6D2 247 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 CSNK1G2-AS1Q8NCQ2 148 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 LRRC20Q8TCA0 184 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 C11orf68Q9H3H3 251 aaKnown RBP15.09■□□□□ 0.01
VARS-218ENST00000459667 XCL2Q9UBD3 114 aa15.09■□□□□ 0.01
VARS-218ENST00000459667 FAM78BQ5VT40 261 aa15.08■□□□□ 0
VARS-218ENST00000459667 INO80EQ8NBZ0 244 aaPredicted RBP15.08■□□□□ 0
VARS-218ENST00000459667 OR2T35Q8NGX2 323 aa15.08■□□□□ 0
VARS-218ENST00000459667 CLUHP3Q96NS8 147 aa15.08■□□□□ 0
VARS-218ENST00000459667 AQP10Q96PS8 301 aa15.08■□□□□ 0
VARS-218ENST00000459667 ZNF705EA8MWA4 302 aaPredicted RBP15.07■□□□□ 0
VARS-218ENST00000459667 CXCL2P19875 107 aa15.07■□□□□ 0
VARS-218ENST00000459667 PMS2P11Q13670 270 aa15.07■□□□□ 0
VARS-218ENST00000459667 ZNF738Q8NE65 137 aa15.07■□□□□ 0
VARS-218ENST00000459667 PARD6GQ9BYG4 376 aaPredicted RBP15.07■□□□□ 0
VARS-218ENST00000459667 FXYD6-FXYD2A0A087WZ82 144 aa15.06■□□□□ 0
VARS-218ENST00000459667 CXorf65A6NEN9 183 aa15.06■□□□□ 0
VARS-218ENST00000459667 DEFB4AO15263 64 aa15.06■□□□□ 0
VARS-218ENST00000459667 FXYD7P58549 80 aa15.06■□□□□ 0
VARS-218ENST00000459667 ZNF266Q14584 549 aa15.06■□□□□ 0
VARS-218ENST00000459667 LCN15Q6UWW0 184 aa15.06■□□□□ 0
VARS-218ENST00000459667 Q8NAQ8 132 aa15.06■□□□□ 0
VARS-218ENST00000459667 X6R8D5 127 aa15.06■□□□□ 0
VARS-218ENST00000459667 SNRPCP09234 159 aaKnown RBP15.05■□□□□ -0
VARS-218ENST00000459667 MIFP14174 115 aa15.05■□□□□ -0
VARS-218ENST00000459667 PSG9Q00887 426 aa15.05■□□□□ -0
VARS-218ENST00000459667 SLC50A1Q9BRV3 221 aa15.05■□□□□ -0
VARS-218ENST00000459667 SLC35B3Q9H1N7 401 aa15.05■□□□□ -0
VARS-218ENST00000459667 TRAV5A0A0B4J249 113 aa15.04■□□□□ -0
VARS-218ENST00000459667 IGHV4-28A0A0C4DH34 117 aa15.04■□□□□ -0
VARS-218ENST00000459667 HLA-DMBP28068 263 aa15.04■□□□□ -0
VARS-218ENST00000459667 Q5BKY6 102 aa15.04■□□□□ -0
VARS-218ENST00000459667 DUSP14O95147 198 aaKnown RBP15.03■□□□□ -0
VARS-218ENST00000459667 IGLC2P0DOY2 106 aa15.03■□□□□ -0
VARS-218ENST00000459667 PSG3Q16557 428 aa15.03■□□□□ -0
VARS-218ENST00000459667 GUK1Q16774 197 aa15.03■□□□□ -0
VARS-218ENST00000459667 MRPL32Q9BYC8 188 aaKnown RBP15.03■□□□□ -0
VARS-218ENST00000459667 MFFQ9GZY8 342 aa15.03■□□□□ -0
VARS-218ENST00000459667 HRH4Q9H3N8 390 aa15.03■□□□□ -0
VARS-218ENST00000459667 WFDC1Q9HC57 220 aa15.03■□□□□ -0
VARS-218ENST00000459667 ZNF331Q9NQX6 463 aaPredicted RBP15.03■□□□□ -0
VARS-218ENST00000459667 A8MTW9 85 aa15.02■□□□□ -0
VARS-218ENST00000459667 H3BTX0 84 aa15.02■□□□□ -0
VARS-218ENST00000459667 ZNF705DP0CH99 300 aaPredicted RBP15.02■□□□□ -0
VARS-218ENST00000459667 ZNF705BP0CI00 300 aaPredicted RBP15.02■□□□□ -0
VARS-218ENST00000459667 CNN1P51911 297 aaKnown RBP15.02■□□□□ -0
VARS-218ENST00000459667 GCSAMLQ5JQS6 135 aa15.02■□□□□ -0
VARS-218ENST00000459667 FFAR4Q5NUL3 377 aa15.02■□□□□ -0
VARS-218ENST00000459667 C11orf45Q8TAV5 145 aa15.02■□□□□ -0
VARS-218ENST00000459667 NUPR2A6NF83 97 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 H3BQ15 152 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 SLC17A3O00476 420 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 RBMY1A1P0DJD3 496 aaKnown RBP15.01□□□□□ -0.01
VARS-218ENST00000459667 RBMY1CP0DJD4 496 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 RBMY1FQ15415 496 aaKnown RBP15.01□□□□□ -0.01
VARS-218ENST00000459667 AMTNQ6UX39 209 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 TMEM14CQ9P0S9 112 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 TNFSF18Q9UNG2 199 aa15.01□□□□□ -0.01
VARS-218ENST00000459667 HIST1H1AQ02539 215 aaPredicted RBP15□□□□□ -0.01
VARS-218ENST00000459667 ZNF705AQ6ZN79 300 aaPredicted RBP15□□□□□ -0.01
VARS-218ENST00000459667 OR8A1Q8NGG7 326 aa15□□□□□ -0.01
VARS-218ENST00000459667 RPUSD4Q96CM3 377 aaKnown RBP15□□□□□ -0.01
VARS-218ENST00000459667 TIMM9Q9Y5J7 89 aa15□□□□□ -0.01
VARS-218ENST00000459667 DYNC2H1Q8NCM8 4307 aaKnown RBP15□□□□□ -0.01
VARS-218ENST00000459667 RYR3Q15413 4870 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 IGHV3OR16-12A0A075B7B8 117 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 LCE6AA0A183 80 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 NANOS2P60321 138 aaKnown RBP14.99□□□□□ -0.01
VARS-218ENST00000459667 RHOBP62745 196 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 ACOT6Q3I5F7 207 aaPredicted RBP14.99□□□□□ -0.01
VARS-218ENST00000459667 FUT9Q9Y231 359 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 TENM2Q9NT68 2774 aa14.99□□□□□ -0.01
VARS-218ENST00000459667 BORCS7-ASMTA0A0B4J1R7 106 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 RNF222A6NCQ9 220 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 ZNF705FA8MVS1 300 aaPredicted RBP14.98□□□□□ -0.01
VARS-218ENST00000459667 PRB4P10163 310 aaPredicted RBP14.98□□□□□ -0.01
VARS-218ENST00000459667 HIST1H1EP10412 219 aaKnown RBP14.98□□□□□ -0.01
VARS-218ENST00000459667 CEMP1Q6PRD7 247 aaPredicted RBP14.98□□□□□ -0.01
VARS-218ENST00000459667 MIR17HGQ75NE6 70 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 SAT2Q96F10 170 aaPredicted RBP14.98□□□□□ -0.01
VARS-218ENST00000459667 NEU1Q99519 415 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 ZNF586Q9NXT0 402 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 GOLT1BQ9Y3E0 138 aa14.98□□□□□ -0.01
VARS-218ENST00000459667 ZNF253O75346 499 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 AMBPP02760 352 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 TAS2R45P59539 299 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 SPINK13Q1W4C9 94 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 HSD17B11Q8NBQ5 300 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 PHLDA1Q8WV24 401 aaPredicted RBP14.97□□□□□ -0.01
VARS-218ENST00000459667 SLC25A2Q9BXI2 301 aa14.97□□□□□ -0.01
VARS-218ENST00000459667 G3V3Q6 166 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 M0R2Z0 102 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 ARPC5O15511 151 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 PYYP10082 97 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 M6PRP20645 277 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 PDE6HQ13956 83 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 IGF2BP2-AS1Q96M15 143 aa14.96□□□□□ -0.01
VARS-218ENST00000459667 PSMG3Q9BT73 122 aaPredicted RBP14.96□□□□□ -0.01
VARS-218ENST00000459667 TRBV19A0A075B6N1 114 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms