RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GRAMD2BQ96HH9 432 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 RPS10P5Q9NQ39 176 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 UFC1Q9Y3C8 167 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 TRBV20OR9-2A0A075B6H5 130 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV3OR16-13A0A075B7E8 117 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV3-74A0A0B4J1X5 117 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 HELTA6NFD8 242 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 REC114Q7Z4M0 266 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 EXOC3-AS1Q8N2X6 119 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 GLMPQ8WWB7 406 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 ATG101Q9BSB4 218 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV7-4-1A0A0J9YVY3 117 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 MEOX2P50222 304 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 CNN1P51911 297 aaKnown RBP18.65■□□□□ 0.58
U2AF1-204ENST00000459639 GNG5P63218 68 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 BTN1A1Q13410 526 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 ADIRFQ15847 76 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 AAMDCQ9H7C9 122 aa18.65■□□□□ 0.58
U2AF1-204ENST00000459639 ZNF785A8K8V0 405 aa18.64■□□□□ 0.57
U2AF1-204ENST00000459639 KHDC1LQ5JSQ8 128 aa18.64■□□□□ 0.57
U2AF1-204ENST00000459639 CMTM2Q8TAZ6 248 aa18.64■□□□□ 0.57
U2AF1-204ENST00000459639 LY96Q9Y6Y9 160 aa18.64■□□□□ 0.57
U2AF1-204ENST00000459639 A0A087WWC5 75 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 LGALS9O00182 355 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 TAS2R60P59551 318 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 TM4SF20Q53R12 229 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 C18orf65Q6ZTR6 163 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 LINC01551Q86U37 167 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 A8MWP6 167 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 TCRAP04437 139 aa18.63■□□□□ 0.57
U2AF1-204ENST00000459639 HOXD3P31249 432 aaPredicted RBP18.63■□□□□ 0.57
U2AF1-204ENST00000459639 DNASE2O00115 360 aaPredicted RBP18.62■□□□□ 0.57
U2AF1-204ENST00000459639 CENPWQ5EE01 88 aa18.62■□□□□ 0.57
U2AF1-204ENST00000459639 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.62■□□□□ 0.57
U2AF1-204ENST00000459639 C1QL4Q86Z23 238 aa18.62■□□□□ 0.57
U2AF1-204ENST00000459639 KLHL30-AS1Q8NEE0 82 aa18.62■□□□□ 0.57
U2AF1-204ENST00000459639 SMPXQ9UHP9 88 aa18.62■□□□□ 0.57
U2AF1-204ENST00000459639 FN1P02751 2386 aaKnown RBP18.62■□□□□ 0.57
U2AF1-204ENST00000459639 GNG4P50150 75 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 ARL6IP6Q8N6S5 226 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 IGF2BP2-AS1Q96M15 143 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 SLC50A1Q9BRV3 221 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 ZNF331Q9NQX6 463 aaPredicted RBP18.61■□□□□ 0.57
U2AF1-204ENST00000459639 RPH3ALQ9UNE2 315 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 KLF12Q9Y4X4 402 aa18.61■□□□□ 0.57
U2AF1-204ENST00000459639 LINC01619G3V211 115 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 S100A9P06702 114 aaKnown RBP18.6■□□□□ 0.57
U2AF1-204ENST00000459639 BMI1P35226 326 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 TMEM183BQ1AE95 376 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 RHPN1-AS1Q9BWJ2 59 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 RNF114Q9Y508 228 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 PGPEP1LA6NFU8 196 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 TMEM88Q6PEY1 159 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 CBLN2Q8IUK8 224 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 PRELID1Q9Y255 219 aa18.6■□□□□ 0.57
U2AF1-204ENST00000459639 TMEM213A2RRL7 107 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 CHEK1O14757 476 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 TSPAN4O14817 238 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 CD28P10747 220 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 SYNJ2BPP57105 145 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 UBE2G1P62253 170 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 DEFB136Q30KP8 78 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 OCC1Q8TAD7 63 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 FMC1Q96HJ9 113 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 LINC00479Q96M42 142 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 SMCO4Q9NRQ5 59 aa18.59■□□□□ 0.57
U2AF1-204ENST00000459639 PROK1P58294 105 aa18.58■□□□□ 0.57
U2AF1-204ENST00000459639 KLF5Q13887 457 aaPredicted RBP18.58■□□□□ 0.57
U2AF1-204ENST00000459639 OR11H1Q8NG94 326 aa18.58■□□□□ 0.57
U2AF1-204ENST00000459639 OR1N2Q8NGR9 330 aa18.58■□□□□ 0.57
U2AF1-204ENST00000459639 DPF1Q92782 380 aa18.58■□□□□ 0.57
U2AF1-204ENST00000459639 ISOC2Q96AB3 205 aa18.58■□□□□ 0.57
U2AF1-204ENST00000459639 ISLRO14498 428 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 CSN1S1P47710 185 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 TRAV34A0A0B4J273 112 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 SERTM2A0A1B0GWG4 89 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 M0R3E3 92 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 HAX1O00165 279 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 MT-ND4LP03901 98 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 RNF212Q495C1 297 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 C8orf86Q6ZUL3 223 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 GOLT1AQ6ZVE7 132 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 CTDSP1Q9GZU7 261 aa18.57■□□□□ 0.56
U2AF1-204ENST00000459639 TSSC4Q9Y5U2 329 aaPredicted RBP18.57■□□□□ 0.56
U2AF1-204ENST00000459639 DIRC3C9JPN6 131 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 K7EQM0 130 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 SLURP1P55000 103 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 TUBA4BQ9H853 241 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 TMEM242Q9NWH2 141 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 AURKAIP1Q9NWT8 199 aaPredicted RBP18.56■□□□□ 0.56
U2AF1-204ENST00000459639 CUBNO60494 3623 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 F8P00451 2351 aa18.56■□□□□ 0.56
U2AF1-204ENST00000459639 TMEM75Q8N9X5 138 aa18.55■□□□□ 0.56
U2AF1-204ENST00000459639 SMIM12Q96EX1 92 aa18.55■□□□□ 0.56
U2AF1-204ENST00000459639 CITED2Q99967 270 aaPredicted RBP18.55■□□□□ 0.56
U2AF1-204ENST00000459639 CLEC5AQ9NY25 188 aa18.55■□□□□ 0.56
U2AF1-204ENST00000459639 NF1P21359 2839 aa18.55■□□□□ 0.56
U2AF1-204ENST00000459639 TRBV6-1A0A0K0K1D8 114 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 K7EN84 100 aa18.54■□□□□ 0.56
U2AF1-204ENST00000459639 IGLV2-8P01709 118 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms