RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SMPXQ9UHP9 88 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 EPDR1Q9UM22 224 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 RELNP78509 3460 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV3OR16-13A0A075B7E8 117 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 A0A087WW49 117 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV3-49A0A0A0MS15 119 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV3-74A0A0B4J1X5 117 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV3-66A0A0C4DH42 116 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 XKRY2A2RUG3 117 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 H3BQ15 152 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 PEX7O00628 323 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ISLRO14498 428 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 MGST1P10620 155 aaKnown RBP4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 CD28P10747 220 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 CBLN1P23435 193 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ATP5G3P48201 142 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 FLI1Q01543 452 aaPredicted RBP4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ADIRFQ15847 76 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 TMEM78Q5T7P6 136 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 EBLN2Q6P2I7 272 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 KCNIP4Q6PIL6 250 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 C16orf54Q6UWD8 224 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 C12orf54Q6X4T0 127 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 C8orf86Q6ZUL3 223 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 TCF24Q7RTU0 167 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 CYB561D1Q8N8Q1 229 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF738Q8NE65 137 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 FXYD5Q96DB9 178 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ANAPC16Q96DE5 110 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 SMIM12Q96EX1 92 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF414Q96IQ9 312 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 CITED2Q99967 270 aaPredicted RBP4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 GPR61Q9BZJ8 451 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 PARLQ9H300 379 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZFAND3Q9H8U3 227 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 NRN1Q9NPD7 142 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZMAT5Q9UDW3 170 aaKnown RBP4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 MLXQ9UH92 298 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZFP30Q9Y2G7 519 aa4.49□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGKV3-7A0A075B6H7 116 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 A0A087X0K7 114 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 OR4C46A6NHA9 309 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 A8MWP6 167 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 F8W735 103 aaPredicted RBP4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 CHEK1O14757 476 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 TSPAN4O14817 238 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 TRBV12-3P01733 135 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 FOLR2P14207 255 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 GP9P14770 177 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 LCN12Q6JVE5 192 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 C10orf99Q6UWK7 81 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 SSX7Q7RTT5 188 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 BAGE2Q86Y30 109 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 WFDC3Q8IUB2 231 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 MYOZ3Q8TDC0 251 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 BORCS7Q96B45 105 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 MRPL53Q96EL3 112 aaKnown RBP4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 FAM167A-AS1Q96KT0 104 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 LINC00052Q96N35 136 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF586Q9NXT0 402 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 CARHSP1Q9Y2V2 147 aaKnown RBP4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 LY96Q9Y6Y9 160 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 MYO9AB2RTY4 2548 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 COL12A1Q99715 3063 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 APCP25054 2843 aa4.48□□□□□ -1.69
RNU1-88P-201ENST00000459274 CRYBG3Q68DQ2 2970 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 ITPR3Q14573 2671 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 GCN1Q92616 2671 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 TRAV25A0A0B4J276 109 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SCO2A0A1W2PP80 73 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 RBAKDNA6NC62 111 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 C2orf70A6NJV1 201 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 C9JCJ5 164 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SAP30O75446 220 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 EIF3GO75821 320 aaKnown RBP eCLIP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 DUSP14O95147 198 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 TCRAP04437 139 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SNRPCP09234 159 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGLC2P0DOY2 106 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 CD33P20138 364 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 TSPOP30536 169 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 RPL35P42766 123 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 INSL3P51460 131 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SLURP1P55000 103 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 PROK1P58294 105 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 CD81P60033 236 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 NUTF2P61970 127 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 PSG3Q16557 428 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 GUCA2BQ16661 112 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 DEFB136Q30KP8 78 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 MORN5Q5VZ52 161 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 UNQ9165/PRO28630Q6UXU0 137 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 GOLT1AQ6ZVE7 132 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 PRNTQ86SH4 94 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms