RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 OR10P1Q8NGE3 313 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 UHRF2Q96PU4 802 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 RCL1Q9Y2P8 373 aaKnown RBP11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 M0R2Z0 102 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 DAD1P61803 113 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 LSM5Q9Y4Y9 91 aaKnown RBP11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 MUC4Q99102 2169 aa11.23□□□□□ -0.61
CHCHD3-204ENST00000457942 TRAV8-2A0A0B4J237 113 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 PMS2P5A8MQ11 134 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 L7N2F9 121 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 RTL8CO15255 209 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 DEFA1P59665 94 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 DEFA3P59666 94 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 RHOBP62745 196 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 VAMP2P63027 116 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 TEPPQ6URK8 271 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 TMEM14EPQ6UXP3 125 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 OR11H7Q8NGC8 314 aa11.22□□□□□ -0.61
CHCHD3-204ENST00000457942 INMT-MINDY4F8WBC2 141 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 GOSR2O14653 212 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 TSC22D2O75157 780 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 MBPP02686 304 aaPredicted RBP11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
CHCHD3-204ENST00000457942 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 A8MTW9 85 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 BOLA2-SMG1P6H3BVE0 249 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 SIX6O95475 246 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 BCAP31P51572 246 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 TAS2R30P59541 319 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 PLP1P60201 277 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 S100A10P60903 97 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 GPN1Q9HCN4 374 aaPredicted RBP11.2□□□□□ -0.62
CHCHD3-204ENST00000457942 A0A087X0K7 114 aa11.19□□□□□ -0.62
CHCHD3-204ENST00000457942 K7EPK0 472 aa11.19□□□□□ -0.62
CHCHD3-204ENST00000457942 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
CHCHD3-204ENST00000457942 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
CHCHD3-204ENST00000457942 OXA1LQ15070 435 aa11.19□□□□□ -0.62
CHCHD3-204ENST00000457942 IGLV2-18A0A075B6J9 118 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 AGPAT2O15120 278 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 CXCL3P19876 107 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 CAV2P51636 162 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 B2MP61769 119 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 PSG3Q16557 428 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 PXDC1Q5TGL8 231 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 TMEM88Q6PEY1 159 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 C2orf50Q96LR7 162 aa11.18□□□□□ -0.62
CHCHD3-204ENST00000457942 C7orf66A4D0T2 115 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 CRXO43186 299 aaPredicted RBP11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 PRM2P04554 102 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 HTN1P15515 57 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 ARL16Q0P5N6 197 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 RAB32Q13637 225 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 RPUSD4Q96CM3 377 aaKnown RBP11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 LINC01587Q99440 93 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 MARVELD1Q9BSK0 173 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 GGACTQ9BVM4 153 aa11.17□□□□□ -0.62
CHCHD3-204ENST00000457942 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
CHCHD3-204ENST00000457942 RAB31Q13636 194 aa11.16□□□□□ -0.62
CHCHD3-204ENST00000457942 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
CHCHD3-204ENST00000457942 MGST2Q99735 147 aa11.16□□□□□ -0.62
CHCHD3-204ENST00000457942 SLC50A1Q9BRV3 221 aa11.16□□□□□ -0.62
CHCHD3-204ENST00000457942 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 H3BTX0 84 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 PRAF2O60831 178 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 CXCL2P19875 107 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 PVALBP20472 110 aaPredicted RBP11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 CAMLGP49069 296 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 LRRC37A5PQ49AS3 106 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 C10orf113Q5VZT2 155 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
CHCHD3-204ENST00000457942 SSNA1O43805 119 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 CST7O76096 145 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 CDKN1BP46527 198 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 Q6ZRG5 221 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 C15orf53Q8NAA6 179 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 ATG101Q9BSB4 218 aa11.14□□□□□ -0.63
CHCHD3-204ENST00000457942 UBE2L5PA0A1B0GUS4 154 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 F5H768 121 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms