RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 C1orf158Q8N1D5 194 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 TMEM37Q8WXS4 190 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 WDR83OSQ9Y284 106 aa15.24■□□□□ 0.03
HMGB3-205ENST00000455596 IGSF23A1L1A6 192 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 SPART-AS1P0CW21 52 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 CXCL2P19875 107 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 EMP1P54849 157 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 BPIFA4PQ86YQ2 179 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 OR11H7Q8NGC8 314 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 IGF2BP2-AS1Q96M15 143 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 APLNQ9ULZ1 77 aa15.23■□□□□ 0.03
HMGB3-205ENST00000455596 UBE2L5PA0A1B0GUS4 154 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 PRAF2O60831 178 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 HBE1P02100 147 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 BAXQ07812 192 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 PSG3Q16557 428 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 MIC13Q5XKP0 118 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 LCN15Q6UWW0 184 aa15.22■□□□□ 0.03
HMGB3-205ENST00000455596 IGHV4-4A0A075B6R2 117 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 DEFB131BA0A096LNP1 70 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PRR20EP86478 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PRR20CP86479 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PRR20DP86480 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PRR20BP86481 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PRR20AP86496 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 ATP6V1FQ16864 119 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 SPINK13Q1W4C9 94 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 RRN3P1Q2M238 152 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 OR1L4Q8NGR5 311 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 SLC50A1Q9BRV3 221 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 TMEM208Q9BTX3 173 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 DNAJC4Q9NNZ3 241 aa15.21■□□□□ 0.03
HMGB3-205ENST00000455596 PLECQ15149 4684 aaKnown RBP15.21■□□□□ 0.02
HMGB3-205ENST00000455596 TEX48A0A1B0GUV7 120 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 INMT-MINDY4F8WBC2 141 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 M0R2Z0 102 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 SIX6O95475 246 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 HIST1H1AQ02539 215 aaPredicted RBP15.2■□□□□ 0.02
HMGB3-205ENST00000455596 OPCMLQ14982 345 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 MORN5Q5VZ52 161 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 OR8A1Q8NGG7 326 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 PFDN5Q99471 154 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 RNF126Q9BV68 326 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 NMES1Q9C002 83 aa15.2■□□□□ 0.02
HMGB3-205ENST00000455596 ZNF331Q9NQX6 463 aaPredicted RBP15.2■□□□□ 0.02
HMGB3-205ENST00000455596 LOC102723971A0A1B0GUV8 181 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 BOLA2-SMG1P6H3BVE0 249 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 INSP01308 110 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 RLN2P04090 185 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 RPL29P47914 159 aaKnown RBP15.19■□□□□ 0.02
HMGB3-205ENST00000455596 B2MP61769 119 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 RHOBP62745 196 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 RPP25LQ8N5L8 163 aaKnown RBP15.19■□□□□ 0.02
HMGB3-205ENST00000455596 SLC39A9Q9NUM3 307 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 PPP1R14DQ9NXH3 145 aa15.19■□□□□ 0.02
HMGB3-205ENST00000455596 CRXO43186 299 aaPredicted RBP15.18■□□□□ 0.02
HMGB3-205ENST00000455596 SNRPCP09234 159 aaKnown RBP15.18■□□□□ 0.02
HMGB3-205ENST00000455596 FGF7P21781 194 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 DEFA1P59665 94 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 DEFA3P59666 94 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 FAM222AQ5U5X8 452 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 CHAC2Q8WUX2 184 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 RPUSD4Q96CM3 377 aaKnown RBP15.18■□□□□ 0.02
HMGB3-205ENST00000455596 DKK2Q9UBU2 259 aa15.18■□□□□ 0.02
HMGB3-205ENST00000455596 E5RGE8 158 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 MPDU1O75352 247 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 CYCSP99999 105 aaKnown RBP15.17■□□□□ 0.02
HMGB3-205ENST00000455596 LRRC37A5PQ49AS3 106 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 BAP18Q8IXM2 172 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 NIPSNAP3BQ9BS92 247 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 MARVELD1Q9BSK0 173 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 SLC25A31Q9H0C2 315 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 BATF3Q9NR55 127 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 YTHDF2Q9Y5A9 579 aaKnown RBP15.17■□□□□ 0.02
HMGB3-205ENST00000455596 PXMP4Q9Y6I8 212 aa15.17■□□□□ 0.02
HMGB3-205ENST00000455596 IGLC2P0DOY2 106 aa15.16■□□□□ 0.02
HMGB3-205ENST00000455596 NHLH2Q02577 135 aa15.16■□□□□ 0.02
HMGB3-205ENST00000455596 TRAV12-2A0A075B6T6 113 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 TRAV5A0A0B4J249 113 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 H3BTX0 84 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 SLC17A3O00476 420 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 GUK1Q16774 197 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 OR5AC2Q9NZP5 309 aa15.15■□□□□ 0.02
HMGB3-205ENST00000455596 H3BQ15 152 aa15.14■□□□□ 0.01
HMGB3-205ENST00000455596 PRB4P10163 310 aaPredicted RBP15.14■□□□□ 0.01
HMGB3-205ENST00000455596 OXA1LQ15070 435 aa15.14■□□□□ 0.01
HMGB3-205ENST00000455596 OR5C1Q8NGR4 320 aa15.14■□□□□ 0.01
HMGB3-205ENST00000455596 SAT2Q96F10 170 aaPredicted RBP15.14■□□□□ 0.01
HMGB3-205ENST00000455596 NDUFAF3Q9BU61 184 aa15.14■□□□□ 0.01
HMGB3-205ENST00000455596 NPCDR1Q9BY65 106 aa15.14■□□□□ 0.01
HMGB3-205ENST00000455596 ZNF705GA8MUZ8 300 aaPredicted RBP15.13■□□□□ 0.01
HMGB3-205ENST00000455596 TMEM256Q8N2U0 113 aa15.13■□□□□ 0.01
HMGB3-205ENST00000455596 OR10J6PQ8NGY7 276 aa15.13■□□□□ 0.01
HMGB3-205ENST00000455596 H0YIZ8 118 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 SSNA1O43805 119 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 CDKN1BP46527 198 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 H2BFSP57053 126 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 THAP6Q8TBB0 222 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 PLA2G2EQ9NZK7 142 aa15.12■□□□□ 0.01
HMGB3-205ENST00000455596 PRM2P04554 102 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms