RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PDE6HQ13956 83 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 SPATA45Q537H7 98 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 HCP5Q6MZN7 132 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 C16orf54Q6UWD8 224 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 NPBQ8NG41 125 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 OR11H6Q8NGC7 330 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 IGFBPL1Q8WX77 278 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 TIMD4Q96H15 378 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 RCHY1Q96PM5 261 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 MDFIQ99750 246 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 FAM103A1Q9BTL3 118 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 SLC25A39Q9BZJ4 359 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 PAM16Q9Y3D7 125 aa8.39□□□□□ -1.07
GTF3C2-206ENST00000454704 H3BRN7 92 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 HAX1O00165 279 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 SMAD7O15105 426 aaKnown RBP8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 FRMD6-AS1P0C7T7 363 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 HTR1DP28221 377 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 KIAA1644Q3SXP7 199 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 COL5A1-AS1Q5SY13 56 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 MUC15Q8N387 334 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 FAM168AQ92567 244 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 LINC00479Q96M42 142 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 Q96MF0 132 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 SHANK2-AS3Q9BTD1 123 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 SSBP3Q9BWW4 388 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 SONP18583 2426 aaKnown RBP8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
GTF3C2-206ENST00000454704 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 M0R2Z0 102 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 SIAH2O43255 324 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 IGLC3P0DOY3 106 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 PSG1P11464 419 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 GNG5P63218 68 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 SLC35B1P78383 322 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 RIGQ13278 110 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 PLGLAQ15195 96 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 ZNF672Q499Z4 452 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 CCDC144NLQ6NUI1 221 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 C1orf122Q6ZSJ8 110 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 KIR3DL3Q8N743 410 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 NEU4Q8WWR8 484 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 CCL19Q99731 98 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 DPM3Q9P2X0 92 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 MRPS16Q9Y3D3 137 aaKnown RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 NPIPB5A8MRT5 1133 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 NBR2O15453 112 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 LINC00614P0C842 121 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 GPR6P46095 362 aaPredicted RBP8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 LYZP61626 148 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 LRRC75A-AS1Q8N1F1 130 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 RITA1Q96K30 269 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 WNT10AQ9GZT5 417 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 THYN1Q9P016 225 aa8.37□□□□□ -1.07
GTF3C2-206ENST00000454704 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 WI2-2373I1.2A0A1W2PRP0 233 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 INAFM1C9JVW0 142 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 CHEK1O14757 476 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 PLAUP00749 431 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 NTF3P20783 257 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 PSG9Q00887 426 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 GDF5OSQ5U4N7 250 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 TXN2Q99757 166 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 TMEM70Q9BUB7 260 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 FBXL15Q9H469 300 aa8.36□□□□□ -1.07
GTF3C2-206ENST00000454704 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 ODF3BA8MYP8 253 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 K7EIM0 57 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 DLEU1O43261 78 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 CNIH1O95406 144 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 CNTFRP26992 372 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 CAMPP49913 170 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 MFAP4P55083 255 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 ZNF124Q15973 351 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 MINOS1Q5TGZ0 78 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 COX8CQ7Z4L0 72 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 RNF125Q96EQ8 232 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 AAMDCQ9H7C9 122 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 ST20Q9HBF5 79 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 MINOS1-NBL1R4GNA1 71 aa8.35□□□□□ -1.07
GTF3C2-206ENST00000454704 FBN1P35555 2871 aaKnown RBP8.34□□□□□ -1.07
GTF3C2-206ENST00000454704 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
GTF3C2-206ENST00000454704 C2orf70A6NJV1 201 aa8.34□□□□□ -1.07
GTF3C2-206ENST00000454704 IGHV3-48P01763 117 aa8.34□□□□□ -1.07
GTF3C2-206ENST00000454704 HLA-DRB1P01911 266 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms