RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZNF331Q9NQX6 463 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-205ENST00000454542 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
HDAC4-205ENST00000454542 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 RNF222A6NCQ9 220 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF705EA8MWA4 302 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-205ENST00000454542 F6UB75 175 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 SLC17A3O00476 420 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF253O75346 499 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 RNF182Q8N6D2 247 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-205ENST00000454542 FAM167A-AS1Q96KT0 104 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 MRPL32Q9BYC8 188 aaKnown RBP10.31□□□□□ -0.76
HDAC4-205ENST00000454542 SMIM3Q9BZL3 60 aa10.31□□□□□ -0.76
HDAC4-205ENST00000454542 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 H3BQ15 152 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 HLA-DMBP28068 263 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 CASC10Q5T4H9 136 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 IGFL4Q6B9Z1 124 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 SLC25A2Q9BXI2 301 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 C1QTNF4Q9BXJ3 329 aa10.3□□□□□ -0.76
HDAC4-205ENST00000454542 IFNA5P01569 189 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
HDAC4-205ENST00000454542 PLECQ15149 4684 aaKnown RBP10.29□□□□□ -0.76
HDAC4-205ENST00000454542 PSG3Q16557 428 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 GUK1Q16774 197 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 Q8NAQ8 132 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 OR11H2Q8NH07 326 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 RARRES2Q99969 163 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF586Q9NXT0 402 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 TNFSF18Q9UNG2 199 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 X6R8D5 127 aa10.29□□□□□ -0.76
HDAC4-205ENST00000454542 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
HDAC4-205ENST00000454542 PDE6HQ13956 83 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF266Q14584 549 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF705AQ6ZN79 300 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-205ENST00000454542 MIR17HGQ75NE6 70 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 ZNF738Q8NE65 137 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 FUT9Q9Y231 359 aa10.28□□□□□ -0.76
HDAC4-205ENST00000454542 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
HDAC4-205ENST00000454542 PYYP10082 97 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 HIST1H1EP10412 219 aaKnown RBP10.27□□□□□ -0.77
HDAC4-205ENST00000454542 PSG9Q00887 426 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 FFAR4Q5NUL3 377 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 OR8A1Q8NGG7 326 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 OR2G3Q8NGZ4 309 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 SCGB1C1Q8TD33 95 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 SLC35B3Q9H1N7 401 aa10.27□□□□□ -0.77
HDAC4-205ENST00000454542 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 H3BTX0 84 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 NDUFB4O95168 129 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 SNRPCP09234 159 aaKnown RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 ZNF705DP0CH99 300 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 ZNF705BP0CI00 300 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 MIFP14174 115 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 ZNF503Q96F45 646 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-205ENST00000454542 MFFQ9GZY8 342 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
HDAC4-205ENST00000454542 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
HDAC4-205ENST00000454542 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
HDAC4-205ENST00000454542 FXYD5Q96DB9 178 aa10.25□□□□□ -0.77
HDAC4-205ENST00000454542 NEU1Q99519 415 aa10.25□□□□□ -0.77
HDAC4-205ENST00000454542 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 BOLA2-SMG1P6H3BVE0 249 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-205ENST00000454542 AMBPP02760 352 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 M6PRP20645 277 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 FXYD7P58549 80 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 RHOBP62745 196 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-205ENST00000454542 INO80EQ8NBZ0 244 aaPredicted RBP10.24□□□□□ -0.77
HDAC4-205ENST00000454542 OR51M1Q9H341 326 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 DNAH1Q9P2D7 4330 aa10.24□□□□□ -0.77
HDAC4-205ENST00000454542 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 RBMY1A1P0DJD3 496 aaKnown RBP10.23□□□□□ -0.77
HDAC4-205ENST00000454542 RBMY1CP0DJD4 496 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 ATP6V0CP27449 155 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 RAB2AP61019 212 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
HDAC4-205ENST00000454542 ACOT6Q3I5F7 207 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-205ENST00000454542 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 ZFAND6Q6FIF0 208 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
HDAC4-205ENST00000454542 HSD17B11Q8NBQ5 300 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms