RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 A0A0B4J2A0 478 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 WRBO00258 174 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC00869P0C866 280 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CXCL3P19876 107 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 M6PRP20645 277 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MEOX2P50222 304 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RRAS2P62070 204 aaPredicted RBP4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SLC38A11Q08AI6 406 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SURF2Q15527 256 aaPredicted RBP4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ESRGQ1W209 222 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SMUG1Q53HV7 270 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TTC32Q5I0X7 151 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SPANXN5Q5MJ07 72 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GFI1BQ5VTD9 330 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MORN5Q5VZ52 161 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SPATA31B1PQ5VZV4 182 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q6ZTI0 123 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMEM144Q7Z5S9 345 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCDC190Q86UF4 302 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OR8A1Q8NGG7 326 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 C16orf74Q96GX8 76 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PRRT1Q99946 306 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ARPC5LQ9BPX5 153 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SHANK2-AS3Q9BTD1 123 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MDFICQ9P1T7 246 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SHPKQ9UHJ6 478 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PFDN2Q9UHV9 154 aa4.13□□□□□ -1.75
HLA-DPA3-207ENST00000454398 A0A096LPF7 62 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CBY3A6NI87 242 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CENPXA8MT69 81 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SSSCA1O60232 199 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PITX3O75364 302 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IGHV3-53P01767 116 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 FABP1P07148 127 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 HOXB5P09067 269 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OR5G3P0C626 314 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TSPOP30536 169 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TAS2R60P59551 318 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC00299Q6ZSB3 139 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 NOXA1Q86UR1 476 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 BPIFCQ8NFQ6 507 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMEM263Q8WUH6 116 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SLIRPQ9GZT3 109 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PPP1R14DQ9NXH3 145 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCDC59Q9P031 241 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 HIGD1AQ9Y241 93 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MRPS16Q9Y3D3 137 aaKnown RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 BOLA1Q9Y3E2 137 aa4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TIMM8BQ9Y5J9 83 aaPredicted RBP4.12□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ANKRD20A5PA0PJZ0 165 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PMS2P5A8MQ11 134 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ADAP1O75689 374 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 NXPH4O95158 308 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RLN2P04090 185 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IL5P05113 134 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IL7P13232 177 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 XGP55808 180 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 POLR2GP62487 172 aaKnown RBP eCLIP4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RAB11AP62491 216 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PPP1R1AQ13522 171 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SPANXN2Q5MJ10 180 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SAMD13Q5VXD3 122 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CYP2G1PQ6ZSU1 146 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RXFP4Q8TDU9 374 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CHAC2Q8WUX2 184 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 DIRAS2Q96HU8 199 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ARL6Q9H0F7 186 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PRELID1Q9Y255 219 aa4.11□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SYNGR2O43760 224 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SCGB1D2O95969 90 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 METTL15P1P0C7V9 234 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RPL7P18124 248 aaKnown RBP4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CDKN1BP46527 198 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RAP2BP61225 183 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SRPXP78539 464 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SSBP1Q04837 148 aaKnown RBP4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PSG3Q16557 428 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GGNBP1Q5YKI7 109 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PATE2Q6UY27 113 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 Q6ZQT7 251 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LINC00612Q8N6U2 182 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OR4D5Q8NGN0 318 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OR10J6PQ8NGY7 276 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LRRC20Q8TCA0 184 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms