RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CKS1BP61024 79 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 GTSF1LQ9H1H1 148 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 MALP21145 153 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 SIGLEC15Q6ZMC9 328 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 TRAV40A0A0B4J280 105 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 NPSP0C0P6 89 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 CD28P10747 220 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 FAM231DQ6ZW35 169 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM178BH3BS89 294 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 AMN1Q8IY45 258 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 GAFA1Q96PS6 74 aa9.79□□□□□ -0.84
SEC16A-207ENST00000453963 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 SRSF6Q13247 344 aaKnown RBP9.78□□□□□ -0.84
SEC16A-207ENST00000453963 UNQ6494/PRO21346Q6UXR6 183 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 V9GYV3 84 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 DSCR9P59020 149 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 PDE6HQ13956 83 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 MLANAQ16655 118 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 SIGLEC9Q9Y336 463 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 ARFGEF3Q5TH69 2177 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 EFNA4P52798 201 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 FXYD7P58549 80 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 RPL15P61313 204 aaKnown RBP9.78□□□□□ -0.84
SEC16A-207ENST00000453963 MINOS1Q5TGZ0 78 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 CYYR1Q96J86 154 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 DPH3P1Q9H4G8 78 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 TMEM14BQ9NUH8 114 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 MINOS1-NBL1R4GNA1 71 aa9.78□□□□□ -0.84
SEC16A-207ENST00000453963 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.84
SEC16A-207ENST00000453963 MBD3L3A6NE82 208 aaPredicted RBP9.77□□□□□ -0.84
SEC16A-207ENST00000453963 WIPF3A6NGB9 483 aa9.77□□□□□ -0.84
SEC16A-207ENST00000453963 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.84
SEC16A-207ENST00000453963 M0R2P5 195 aa9.77□□□□□ -0.84
SEC16A-207ENST00000453963 MBD3L2Q8NHZ7 208 aaPredicted RBP9.77□□□□□ -0.84
SEC16A-207ENST00000453963 SRSF8Q9BRL6 282 aaKnown RBP9.77□□□□□ -0.84
SEC16A-207ENST00000453963 SELENOKQ9Y6D0 94 aa9.77□□□□□ -0.84
SEC16A-207ENST00000453963 DOCK11Q5JSL3 2073 aa9.77□□□□□ -0.84
SEC16A-207ENST00000453963 CMC4P56277 68 aaPredicted RBP9.77□□□□□ -0.85
SEC16A-207ENST00000453963 C9orf139Q6ZV77 190 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 FNDC1Q4ZHG4 1894 aaPredicted RBP9.77□□□□□ -0.85
SEC16A-207ENST00000453963 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 IGHG3P01860 377 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 C15orf32Q32M92 178 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 MCRIP2Q9BUT9 160 aaKnown RBP9.77□□□□□ -0.85
SEC16A-207ENST00000453963 ARMS2P0C7Q2 107 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 ADAMTSL5Q6ZMM2 481 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 C11orf52Q96A22 123 aa9.77□□□□□ -0.85
SEC16A-207ENST00000453963 TSC2P49815 1807 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 IGKV1-16P04430 117 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 COA6Q5JTJ3 125 aaKnown RBP9.76□□□□□ -0.85
SEC16A-207ENST00000453963 MORN3Q6PF18 240 aaPredicted RBP9.76□□□□□ -0.85
SEC16A-207ENST00000453963 SHANK2-AS3Q9BTD1 123 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 MYLKQ15746 1914 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 VCYO14598 125 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 C5orf64Q2M2E5 130 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 LINC00527Q9UJ94 153 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 CHCHD5Q9BSY4 110 aa9.76□□□□□ -0.85
SEC16A-207ENST00000453963 HEATR5AQ86XA9 2040 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 A0A0G2JNJ9 132 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 DTX2Q86UW9 622 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 STPG4Q8N801 248 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 Q8TAT8 98 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 Q9UFV3 132 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 TMEM8BA6NDV4 472 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 IGLL1P15814 213 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 ZNF562Q6V9R5 426 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 SMIM27A0A1W2PRY6 76 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 IGLV3-1P01715 115 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 PRTN3P24158 256 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 HAPLN4Q86UW8 402 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 TMEM249Q2WGJ8 235 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
SEC16A-207ENST00000453963 GNLYP22749 145 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 ZNF524Q96C55 264 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 DOCK9Q9BZ29 2069 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 PRB4P10163 310 aaPredicted RBP9.74□□□□□ -0.85
SEC16A-207ENST00000453963 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
SEC16A-207ENST00000453963 SLAQ13239 276 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 FAM104BQ5XKR9 115 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 GTF3C1Q12789 2109 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 A0A1W2PPI3 338 aa9.74□□□□□ -0.85
SEC16A-207ENST00000453963 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms