RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 LINC00052Q96N35 136 aa11.61□□□□□ -0.55
RBM39-219ENST00000453310 HRH4Q9H3N8 390 aa11.61□□□□□ -0.55
RBM39-219ENST00000453310 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 H3BQ15 152 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 H3BTX0 84 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
RBM39-219ENST00000453310 HIST1H1EP10412 219 aaKnown RBP11.6□□□□□ -0.55
RBM39-219ENST00000453310 EIF5AP63241 154 aaKnown RBP11.6□□□□□ -0.55
RBM39-219ENST00000453310 GUK1Q16774 197 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 KHDC3LQ587J8 217 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 TMEM41BQ5BJD5 291 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 LRRC20Q8TCA0 184 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 C20orf173Q96LM9 149 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 B9D2Q9BPU9 175 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 OR51M1Q9H341 326 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
RBM39-219ENST00000453310 LOC102724200A0A096LPH7 203 aaPredicted RBP11.59□□□□□ -0.55
RBM39-219ENST00000453310 SLC17A3O00476 420 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 OR7C2O60412 319 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
RBM39-219ENST00000453310 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 LINC00322Q6ZN03 302 aaPredicted RBP11.59□□□□□ -0.55
RBM39-219ENST00000453310 RPP25LQ8N5L8 163 aaKnown RBP11.59□□□□□ -0.55
RBM39-219ENST00000453310 STOML3Q8TAV4 291 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 ZNF331Q9NQX6 463 aaPredicted RBP11.59□□□□□ -0.55
RBM39-219ENST00000453310 RPRMQ9NS64 109 aa11.59□□□□□ -0.55
RBM39-219ENST00000453310 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.56
RBM39-219ENST00000453310 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 STHQ8IWL8 128 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 BAP18Q8IXM2 172 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 FXYD5Q96DB9 178 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 SAT2Q96F10 170 aaPredicted RBP11.58□□□□□ -0.56
RBM39-219ENST00000453310 ZNF503Q96F45 646 aa11.58□□□□□ -0.56
RBM39-219ENST00000453310 TRBV19A0A075B6N1 114 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 HMGB3O15347 200 aaKnown RBP11.57□□□□□ -0.56
RBM39-219ENST00000453310 ZNF253O75346 499 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 OR10J4P0C629 311 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 SEC11BP0C7V7 166 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 RPL35AP18077 110 aaKnown RBP11.57□□□□□ -0.56
RBM39-219ENST00000453310 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 DEFB1P60022 68 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 UBE2L3P68036 154 aaKnown RBP11.57□□□□□ -0.56
RBM39-219ENST00000453310 PDE6HQ13956 83 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 SBSPONQ8IVN8 264 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 BLNKQ8WV28 456 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 ASCL2Q99929 193 aa11.57□□□□□ -0.56
RBM39-219ENST00000453310 ACTR3CQ9C0K3 210 aaPredicted RBP11.57□□□□□ -0.56
RBM39-219ENST00000453310 HUWE1Q7Z6Z7 4374 aaKnown RBP11.57□□□□□ -0.56
RBM39-219ENST00000453310 NBEAP1P0C6P0 100 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 C4BPBP20851 252 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
RBM39-219ENST00000453310 HAGHQ16775 308 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 PQLC2Q6ZP29 291 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 SLC51BQ86UW2 128 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 SAV1Q9H4B6 383 aaPredicted RBP11.56□□□□□ -0.56
RBM39-219ENST00000453310 AGRNO00468 2067 aa11.56□□□□□ -0.56
RBM39-219ENST00000453310 NDUFB4O95168 129 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 STAG3L2P0CL84 134 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 STAG3L3P0CL85 134 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 ARL14EPLP0DKL9 152 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 PSG3Q16557 428 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 SSX7Q7RTT5 188 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 TRPT1Q86TN4 253 aaKnown RBP11.55□□□□□ -0.56
RBM39-219ENST00000453310 TMED6Q8WW62 240 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
RBM39-219ENST00000453310 KIR2DL5BA0A0G2JN68 375 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 KIR2DL5BA0A0G2JPC4 375 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 UMAD1C9J7I0 102 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 F6UB75 175 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 H3BMM0 161 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 APOC4P55056 127 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 PSG9Q00887 426 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 EBLN2Q6P2I7 272 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 KIR2DL5AQ8N109 375 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 KIR2DL5BQ8NHK3 375 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 PHYHIPLQ96FC7 376 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
RBM39-219ENST00000453310 RPUSD4Q96CM3 377 aaKnown RBP11.53□□□□□ -0.56
RBM39-219ENST00000453310 A0A0J9YX75 114 aa11.52□□□□□ -0.57
RBM39-219ENST00000453310 CXorf1O96002 111 aa11.52□□□□□ -0.57
RBM39-219ENST00000453310 GCHFRP30047 84 aa11.52□□□□□ -0.57
RBM39-219ENST00000453310 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
RBM39-219ENST00000453310 EXOC3-AS1Q8N2X6 119 aa11.52□□□□□ -0.57
RBM39-219ENST00000453310 MRPL53Q96EL3 112 aaKnown RBP11.52□□□□□ -0.57
RBM39-219ENST00000453310 TM2D3Q9BRN9 247 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 741.1 ms