RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 LYPD1Q8N2G4 141 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 EXOC3-AS1Q8N2X6 119 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 C11orf44Q8N8P7 122 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 KLHL30-AS1Q8NEE0 82 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 OR11H1Q8NG94 326 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 OR4F17Q8NGA8 305 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 OR1N2Q8NGR9 330 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 C2CD4CQ8TF44 421 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 GPR82Q96P67 336 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 DUX3Q96PT4 197 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 CITED2Q99967 270 aaPredicted RBP4.56□□□□□ -1.68
SDC4P-201ENST00000453285 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 NKX6-2Q9C056 277 aaPredicted RBP4.56□□□□□ -1.68
SDC4P-201ENST00000453285 PARLQ9H300 379 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 Q9H3A6 140 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 SDF2L1Q9HCN8 221 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 OTORQ9NRC9 128 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 SMPXQ9UHP9 88 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 ATRQ13535 2644 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 TRBV20OR9-2A0A075B6H5 130 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 A0A1W2PS18 150 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF785A8K8V0 405 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF253O75346 499 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 SYNJ2BPP57105 145 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 GNG5P63218 68 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 FHL3Q13643 280 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 C8orf86Q6ZUL3 223 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 C1QL4Q86Z23 238 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.55□□□□□ -1.68
SDC4P-201ENST00000453285 CLRN3Q8NCR9 226 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 RPUSD4Q96CM3 377 aaKnown RBP4.55□□□□□ -1.68
SDC4P-201ENST00000453285 TVP23CQ96ET8 276 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 RHPN1-AS1Q9BWJ2 59 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF331Q9NQX6 463 aaPredicted RBP4.55□□□□□ -1.68
SDC4P-201ENST00000453285 DAZ1Q9NQZ3 744 aaKnown RBP4.55□□□□□ -1.68
SDC4P-201ENST00000453285 EPDR1Q9UM22 224 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 UFC1Q9Y3C8 167 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 TSSC4Q9Y5U2 329 aaPredicted RBP4.55□□□□□ -1.68
SDC4P-201ENST00000453285 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
SDC4P-201ENST00000453285 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 A0A1B0GUS0 222 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 C2orf70A6NJV1 201 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 M0R3E3 92 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 CCL24O00175 119 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 PEX7O00628 323 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 SOCS3O14543 225 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 SCO1O75880 301 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 IGLV2-8P01709 118 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 TCRAP04437 139 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 SLC25A5P05141 298 aaKnown RBP4.54□□□□□ -1.68
SDC4P-201ENST00000453285 ATF4P18848 351 aaPredicted RBP4.54□□□□□ -1.68
SDC4P-201ENST00000453285 CBLN1P23435 193 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 HLA-DMBP28068 263 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 RPL35P42766 123 aaKnown RBP4.54□□□□□ -1.68
SDC4P-201ENST00000453285 GALR1P47211 349 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 RPL23P62829 140 aaKnown RBP4.54□□□□□ -1.68
SDC4P-201ENST00000453285 PSG9Q00887 426 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 KHDC1LQ5JSQ8 128 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 IGFL4Q6B9Z1 124 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 SVBPQ8N300 66 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 ARL6IP6Q8N6S5 226 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 OCC1Q8TAD7 63 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 DPF1Q92782 380 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 DLX4Q92988 240 aaPredicted RBP4.54□□□□□ -1.68
SDC4P-201ENST00000453285 HIST1H2BAQ96A08 127 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 IGF2BP2-AS1Q96M15 143 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 LINC00479Q96M42 142 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 SMIM7Q9BQ49 75 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 TCEAL7Q9BRU2 100 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 KLF12Q9Y4X4 402 aa4.54□□□□□ -1.68
SDC4P-201ENST00000453285 TRAV34A0A0B4J273 112 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 A0A1W2PRX2 142 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 C7orf77A4D0Y5 90 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 HELTA6NFD8 242 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 C9JCJ5 164 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 DIRC3C9JPN6 131 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 ISLRO14498 428 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 SNAPINO95295 136 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 IGLV2-11P01706 119 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 CSN3P07498 182 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 FOLR2P14207 255 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 MEOX2P50222 304 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 TAS2R60P59551 318 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 PNRC1Q12796 327 aaPredicted RBP4.53□□□□□ -1.68
SDC4P-201ENST00000453285 FOXL1Q12952 345 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 TMEM183BQ1AE95 376 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 AWAT1Q58HT5 328 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 TCF24Q7RTU0 167 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 LINC01551Q86U37 167 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 OR9G4Q8NGQ1 327 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 GRAMD2BQ96HH9 432 aa4.53□□□□□ -1.68
SDC4P-201ENST00000453285 SLC50A1Q9BRV3 221 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms