RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PPT1P50897 306 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 ODF3L2Q3SX64 289 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 ZNF600Q6ZNG1 722 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 Q6ZWC4 215 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 GBGT1Q8N5D6 347 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 TMEM231Q9H6L2 316 aa16.06■□□□□ 0.16
C9orf3-208ENST00000451893 OR5G3P0C626 314 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 ZNF90Q03938 601 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 PEA15Q15121 130 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 LCN15Q6UWW0 184 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 TCF24Q7RTU0 167 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 WFDC3Q8IUB2 231 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 NARS2Q96I59 477 aaKnown RBP16.05■□□□□ 0.16
C9orf3-208ENST00000451893 FAM210AQ96ND0 272 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 TP53TG1Q9Y2A0 90 aa16.05■□□□□ 0.16
C9orf3-208ENST00000451893 PUS1Q9Y606 427 aaKnown RBP eCLIP16.05■□□□□ 0.16
C9orf3-208ENST00000451893 KIR2DL5BA0A0G2JN68 375 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 KIR2DL5BA0A0G2JPC4 375 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 TOMM40O96008 361 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 IFNA1P01562 189 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 IGKV1-17P01599 117 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 RD3LP0DJH9 198 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 TAS2R45P59539 299 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 TOMM20LQ6UXN7 152 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 APRG1Q8IVJ8 170 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 KIR2DL5AQ8N109 375 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 KIR2DL5BQ8NHK3 375 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 FUT9Q9Y231 359 aa16.04■□□□□ 0.16
C9orf3-208ENST00000451893 A0A0J9YWU9 116 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 COX7A2P2O60397 106 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 CXorf1O96002 111 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 STAG3L2P0CL84 134 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 STAG3L3P0CL85 134 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 S100A7P31151 101 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 PSMB3P49720 205 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 GCSAMLQ5JQS6 135 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 OR51G1Q8NGK1 321 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 Q8WTZ3 238 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 SLC25A22Q9H936 323 aa16.03■□□□□ 0.16
C9orf3-208ENST00000451893 IGHV3-66A0A0C4DH42 116 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 A0A1W2PS18 150 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 KRBOX1C9JBD0 128 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 NDUFS6O75380 124 aaKnown RBP16.02■□□□□ 0.16
C9orf3-208ENST00000451893 HYPMO75409 117 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 GATA2P23769 480 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-208ENST00000451893 GUK1Q16774 197 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 TIGITQ495A1 244 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 FAM78BQ5VT40 261 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 C10orf113Q5VZT2 155 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 METTL26Q96S19 204 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 RNF24Q9Y225 148 aa16.02■□□□□ 0.16
C9orf3-208ENST00000451893 RBFOX3A6NFN3 312 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 PSG1P11464 419 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 NPPCP23582 126 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 PQLC2Q6ZP29 291 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 STXBP6Q8NFX7 210 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 RABAC1Q9UI14 185 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 STARD9Q9P2P6 4700 aa16.01■□□□□ 0.15
C9orf3-208ENST00000451893 CCL20P78556 96 aa16■□□□□ 0.15
C9orf3-208ENST00000451893 KHDC3LQ587J8 217 aa16■□□□□ 0.15
C9orf3-208ENST00000451893 SSX7Q7RTT5 188 aa16■□□□□ 0.15
C9orf3-208ENST00000451893 MAP6D1Q9H9H5 199 aa16■□□□□ 0.15
C9orf3-208ENST00000451893 SEPSECSQ9HD40 501 aaKnown RBP16■□□□□ 0.15
C9orf3-208ENST00000451893 MANBALQ9NQG1 85 aa16■□□□□ 0.15
C9orf3-208ENST00000451893 RNF183Q96D59 192 aa15.99■□□□□ 0.15
C9orf3-208ENST00000451893 GRAMD2BQ96HH9 432 aa15.99■□□□□ 0.15
C9orf3-208ENST00000451893 EIF5A2Q9GZV4 153 aaKnown RBP15.99■□□□□ 0.15
C9orf3-208ENST00000451893 CSTL1Q9H114 145 aa15.99■□□□□ 0.15
C9orf3-208ENST00000451893 NUPR2A6NF83 97 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 ORM2P19652 201 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 ZNF506Q5JVG8 444 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 PATE2Q6UY27 113 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 TXNDC17Q9BRA2 123 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 SCRT1Q9BWW7 348 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 TREM1Q9NP99 234 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 HIGD1AQ9Y241 93 aa15.98■□□□□ 0.15
C9orf3-208ENST00000451893 CSMD3Q7Z407 3707 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 A0A1B0GV50 99 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 FGF8P55075 233 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-208ENST00000451893 ZNF124Q15973 351 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 OR1B1Q8NGR6 318 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 SUN5Q8TC36 379 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 MS4A6AQ9H2W1 248 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 ZFAND3Q9H8U3 227 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 TMEM167BQ9NRX6 74 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 ARL2-SNX15V9GYD0 113 aa15.97■□□□□ 0.15
C9orf3-208ENST00000451893 TMEM218A2RU14 115 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 APOHP02749 345 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-208ENST00000451893 BCL2P10415 239 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 TOR2AQ5JU69 321 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 FAM90A2PQ658T7 463 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 MIR17HGQ75NE6 70 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 LINC00305Q7Z4B0 112 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 RNF125Q96EQ8 232 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 GNG13Q9P2W3 67 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 VAX2Q9UIW0 290 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 RYR2Q92736 4967 aa15.96■□□□□ 0.15
C9orf3-208ENST00000451893 DYNC2H1Q8NCM8 4307 aaKnown RBP15.95■□□□□ 0.14
C9orf3-208ENST00000451893 LOC102723971A0A1B0GUV8 181 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms