RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 S4R3C0 116 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 ARL2-SNX15V9GYD0 113 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
COL27A1-202ENST00000451716 ADMP35318 185 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 KLF17Q5JT82 389 aaPredicted RBP9.58□□□□□ -0.88
COL27A1-202ENST00000451716 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 WNT10AQ9GZT5 417 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 SERTAD4Q9NUC0 356 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 DPM3Q9P2X0 92 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 RBP4P02753 201 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 NEGR1Q7Z3B1 354 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
COL27A1-202ENST00000451716 ZFP36P26651 326 aaKnown RBP9.57□□□□□ -0.88
COL27A1-202ENST00000451716 IER3P46695 156 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 RPEL1Q2QD12 228 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 IGF2BP2-AS1Q96M15 143 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 UBTD1Q9HAC8 227 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 LY96Q9Y6Y9 160 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 ISLRO14498 428 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 LYZP61626 148 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 PVRIGQ6DKI7 326 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 OR4F17Q8NGA8 305 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 FAM168AQ92567 244 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 TRGV9Q99603 122 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 RNF114Q9Y508 228 aa9.57□□□□□ -0.88
COL27A1-202ENST00000451716 CACNA1AO00555 2505 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 IBA57Q5T440 356 aaKnown RBP9.56□□□□□ -0.88
COL27A1-202ENST00000451716 OR11H6Q8NGC7 330 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 CFHR4Q92496 578 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 PERPQ96FX8 193 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 FBXL7Q9UJT9 491 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-202ENST00000451716 PEX7O00628 323 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 Q8N976 141 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 NEU4Q8WWR8 484 aaPredicted RBP9.56□□□□□ -0.88
COL27A1-202ENST00000451716 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
COL27A1-202ENST00000451716 PGPA6NDG6 321 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 I3L2K1 104 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 NBR2O15453 112 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 VMO1Q7Z5L0 202 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 DEFB125Q8N687 156 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 EPG5Q9HCE0 2579 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 SNURFLB1AK76 121 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 TGFAP01135 160 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 PRTN3P24158 256 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 CD300EQ496F6 205 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 KIR3DL3Q8N743 410 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 RNF183Q96D59 192 aa9.55□□□□□ -0.88
COL27A1-202ENST00000451716 PEF1Q9UBV8 284 aaKnown RBP9.55□□□□□ -0.88
COL27A1-202ENST00000451716 NCBP2LA6PVI3 153 aaKnown RBP9.54□□□□□ -0.88
COL27A1-202ENST00000451716 B5MCH6 92 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 C19orf84I3L1E1 186 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 YPEL3P61236 119 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-202ENST00000451716 MRPL54Q6P161 138 aaKnown RBP9.54□□□□□ -0.88
COL27A1-202ENST00000451716 ATOH7Q8N100 152 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 SMIM17P0DL12 118 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 AMTP48728 403 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 DTX2Q86UW9 622 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 CELSR2Q9HCU4 2923 aa9.54□□□□□ -0.88
COL27A1-202ENST00000451716 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 ODF3BA8MYP8 253 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 F2Z2F3 143 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 K7EIM0 57 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 GNLYP22749 145 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 PRR31Q5SQ13 230 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 RASL11BQ9BPW5 248 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 M0R1W7 72 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 SERF1AO75920 110 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 GP9P14770 177 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 EPDR1Q9UM22 224 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 ZNF207O43670 478 aaKnown RBP9.53□□□□□ -0.88
COL27A1-202ENST00000451716 MYCNOSP40205 109 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 GAGE5Q13069 117 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 GAGE6Q13070 117 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 RNF5Q99942 180 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 TP53TG3Q9ULZ0 132 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 HIGD1AQ9Y241 93 aa9.53□□□□□ -0.88
COL27A1-202ENST00000451716 NUDT3O95989 172 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 CX3CL1P78423 397 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 NDPQ00604 133 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 BCL6BQ8N143 479 aaPredicted RBP9.52□□□□□ -0.89
COL27A1-202ENST00000451716 NAT8BQ9UHF3 227 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
COL27A1-202ENST00000451716 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms