RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 LSM5Q9Y4Y9 91 aaKnown RBP11.49□□□□□ -0.57
SGCE-208ENST00000450385 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
SGCE-208ENST00000450385 F6UB75 175 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 COX7A2P2O60397 106 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 CXCL3P19876 107 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 TSPOP30536 169 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 RPL29P47914 159 aaKnown RBP11.48□□□□□ -0.57
SGCE-208ENST00000450385 CAMLGP49069 296 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 SULT1A1P50225 295 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 DEFB1P60022 68 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 CYCSP99999 105 aaKnown RBP11.48□□□□□ -0.57
SGCE-208ENST00000450385 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 C1orf158Q8N1D5 194 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 OR11H7Q8NGC8 314 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 SEC22CQ9BRL7 303 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 TMEM208Q9BTX3 173 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 NDUFAF3Q9BU61 184 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
SGCE-208ENST00000450385 DNAH6Q9C0G6 4158 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 VPS13DQ5THJ4 4388 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 IGHV3OR16-12A0A075B7B8 117 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 CCSO14618 274 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
SGCE-208ENST00000450385 PRAF2O60831 178 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 INSP01308 110 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 RLN2P04090 185 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 P0DMU3 169 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 FAM231AP0DMU4 169 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 FAM231CP0DMU5 169 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 FXYD7P58549 80 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 MGST2Q99735 147 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
SGCE-208ENST00000450385 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
SGCE-208ENST00000450385 LOC102723971A0A1B0GUV8 181 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 A6NHS1 94 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 UPK1BO75841 260 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PRR20EP86478 221 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PRR20CP86479 221 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PRR20DP86480 221 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PRR20BP86481 221 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PRR20AP86496 221 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 NRARPQ7Z6K4 114 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 ENKURQ8TC29 256 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 C20orf144Q9BQM9 153 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 PPP1R14DQ9NXH3 145 aa11.46□□□□□ -0.57
SGCE-208ENST00000450385 LYRM9A8MSI8 78 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 BOLA2-SMG1P6H3BVE0 249 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 ZNF253O75346 499 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 CST7O76096 145 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 TMEM252Q8N6L7 170 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 NMES1Q9C002 83 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 PTTG2Q9NZH5 202 aa11.45□□□□□ -0.58
SGCE-208ENST00000450385 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
SGCE-208ENST00000450385 CRXO43186 299 aaPredicted RBP11.44□□□□□ -0.58
SGCE-208ENST00000450385 EMP1P54849 157 aa11.44□□□□□ -0.58
SGCE-208ENST00000450385 RAB32Q13637 225 aa11.44□□□□□ -0.58
SGCE-208ENST00000450385 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
SGCE-208ENST00000450385 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
SGCE-208ENST00000450385 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
SGCE-208ENST00000450385 E5RGE8 158 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 CDKN1BP46527 198 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 S100A10P60903 97 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 RHOBP62745 196 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 SPINK13Q1W4C9 94 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 IGFL4Q6B9Z1 124 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 SAT2Q96F10 170 aaPredicted RBP11.43□□□□□ -0.58
SGCE-208ENST00000450385 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
SGCE-208ENST00000450385 BIRC6Q9NR09 4857 aa11.43□□□□□ -0.58
SGCE-208ENST00000450385 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 TAS2R60P59551 318 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 DAD1P61803 113 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
SGCE-208ENST00000450385 BAXQ07812 192 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 PDE6HQ13956 83 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 OPCMLQ14982 345 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 POM121L12Q8N7R1 296 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
SGCE-208ENST00000450385 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 TMEM14CQ9P0S9 112 aa11.42□□□□□ -0.58
SGCE-208ENST00000450385 M0R2Z0 102 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 DEFA1P59665 94 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 DEFA3P59666 94 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 BATF3Q9NR55 127 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
SGCE-208ENST00000450385 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
SGCE-208ENST00000450385 H7BYZ3 331 aa11.4□□□□□ -0.58
SGCE-208ENST00000450385 RNF212Q495C1 297 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms