RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	S100A1	P23297	94 aa		6.54	□□□□□ -1.36
HCG18-238	ENST00000449544	C18orf65	Q6ZTR6	163 aa		6.54	□□□□□ -1.36
HCG18-238	ENST00000449544	FUT9	Q9Y231	359 aa		6.54	□□□□□ -1.36
HCG18-238	ENST00000449544	C11orf94	C9JXX5	98 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	TRBV12-3	P01733	135 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	ATP5G1	P05496	136 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	SRI	P30626	198 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	ATP5G3	P48201	142 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	C1orf194	Q5T5A4	169 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544		Q6ZSR3	168 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	ZNF502	Q8TBZ5	544 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	CTDSP1	Q9GZU7	261 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	RFNG	Q9Y644	331 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544		A0A0J9YY99	117 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	PAGE4	O60829	102 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	CGB7	P0DN87	165 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	EVI2A	P22794	236 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	TMUB2	Q71RG4	321 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	OR11H4	Q8NGC9	324 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	ATP6V0C	P27449	155 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	RPP25L	Q8N5L8	163 aa	Known RBP	6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	LINC00477	Q96M19	166 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	IGLC7	A0M8Q6	106 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	SMLR1	H3BR10	107 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544		M0R2Z0	102 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	EBI3	Q14213	229 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	DEFB114	Q30KQ6	69 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544	NDUFAF3	Q9BU61	184 aa		6.53	□□□□□ -1.36
HCG18-238	ENST00000449544		H7BYZ3	331 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	EIF3G	O75821	320 aa	Known RBP eCLIP	6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	MT-ND4L	P03901	98 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF705D	P0CH99	300 aa	Predicted RBP	6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF705B	P0CI00	300 aa	Predicted RBP	6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	RAB24	Q969Q5	203 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	TXNDC17	Q9BRA2	123 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544		V9GYH0	126 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	USF2	Q15853	346 aa	Predicted RBP	6.52	□□□□□ -1.37
HCG18-238	ENST00000449544		Q9H3A6	140 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	TNFSF18	Q9UNG2	199 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	TRAV12-2	A0A075B6T6	113 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544		K7EMT4	169 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	PAX4	O43316	350 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	PITX3	O75364	302 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	TRGC1	P0CF51	173 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	SLA	Q13239	276 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	NMS	Q5H8A3	153 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	FOXI2	Q6ZQN5	318 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	PUSL1	Q8N0Z8	303 aa	Known RBP	6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	FAM210B	Q96KR6	192 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	WWC2-AS2	Q96NR7	200 aa		6.52	□□□□□ -1.37
HCG18-238	ENST00000449544	IGLV11-55	A0A075B6I3	123 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544		F8W036	122 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	PSMB8	P28062	276 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	CDKN1B	P46527	198 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	BSX	Q3C1V8	233 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	NPCDR1	Q9BY65	106 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF586	Q9NXT0	402 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	ARL14EPL	P0DKL9	152 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	POU2AF1	Q16633	256 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	IGF2BP2-AS1	Q96M15	143 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	PYY	P10082	97 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	C19orf54	Q5BKX5	351 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	AP5S1	Q9NUS5	200 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	COL12A1	Q99715	3063 aa		6.51	□□□□□ -1.37
HCG18-238	ENST00000449544	DEFB131B	A0A096LNP1	70 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF138	P52744	262 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF767P	Q75MW2	155 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	CYB561D1	Q8N8Q1	229 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	C15orf53	Q8NAA6	179 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544		B4DEV8	164 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	HLA-DMB	P28068	263 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	CAMP	P49913	170 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	TWIST1	Q15672	202 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	ZNF79	Q15937	498 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	AARD	Q4LEZ3	155 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	MIR17HG	Q75NE6	70 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	OR8A1	Q8NGG7	326 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	DMXL1	Q9Y485	3027 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	HIVEP1	P15822	2718 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544		A0A096LPF7	62 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	FABP5P3	A8MUU1	101 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	PAX2	Q02962	417 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	TMEM101	Q96IK0	257 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	OR5AC2	Q9NZP5	309 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	PCSK5	Q92824	1860 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	GRIFIN	A4D1Z8	144 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	LY6L	H3BQJ8	138 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	S100A9	P06702	114 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	RPL29	P47914	159 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	RPL36A	P83881	106 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	IFITM3	Q01628	133 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	KRTAP1-3	Q8IUG1	177 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	RNF182	Q8N6D2	247 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	RPL36AL	Q969Q0	106 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	LINC00574	Q9H8X3	128 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	SEPSECS	Q9HD40	501 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	NOP10	Q9NPE3	64 aa	Known RBP	6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	MANBAL	Q9NQG1	85 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	KLK9	Q9UKQ9	250 aa		6.5	□□□□□ -1.37
HCG18-238	ENST00000449544	IGHV3-73	A0A0B4J1V6	119 aa		6.49	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms