RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	MLST8	Q9BVC4	326 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	IGLV1-40	P01703	118 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611		Q6YL49	198 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	FAM231D	Q6ZW35	169 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	OR8I2	Q8N0Y5	310 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	USMG5	Q96IX5	58 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	SMAD5-AS1	Q9Y6J3	95 aa		13.68	□□□□□ -0.22
LMNA-208	ENST00000448611	ZAN	Q9Y493	2812 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	TRAV9-1	A0A075B6T8	112 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	IGLV2-11	P01706	119 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	TRGC1	P0CF51	173 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	RPEL1	Q2QD12	228 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	KLK15	Q9H2R5	256 aa		13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	SETX	Q7Z333	2677 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-208	ENST00000448611	ZNF320	A2RRD8	509 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	UBE2C	O00762	179 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	BUB3	O43684	328 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	SMUG1	Q53HV7	270 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	GOLT1A	Q6ZVE7	132 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	RAB9A	P51151	201 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611		Q86TA4	180 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	VPREB3	Q9UKI3	123 aa		13.66	□□□□□ -0.22
LMNA-208	ENST00000448611	TRAV8-1	A0A0A6YYK1	113 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	TRBV6-1	A0A0K0K1D8	114 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	PF4V1	P10720	104 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	ARL3	P36405	182 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	FABP9	Q0Z7S8	132 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	TMEM95	Q3KNT9	176 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	ACTL10	Q5JWF8	245 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	PRDM13	Q9H4Q3	707 aa		13.65	□□□□□ -0.22
LMNA-208	ENST00000448611	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	PSG9	Q00887	426 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	CIART	Q8N365	385 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	DIRC3	C9JPN6	131 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611		M0R3E3	92 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF253	O75346	499 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	TRBV12-3	P01733	135 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	PRR27	Q6MZM9	219 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	TMEM75	Q8N9X5	138 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	NUDT10	Q8NFP7	164 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	NUDT11	Q96G61	164 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611	AAMDC	Q9H7C9	122 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611		U3KQE9	123 aa		13.64	□□□□□ -0.23
LMNA-208	ENST00000448611		A0A087X0K7	114 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	SMIM27	A0A1W2PRY6	76 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	NDUFA6	P56556	154 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	C1orf194	Q5T5A4	169 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	TMEM183A	Q8IXX5	376 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	METTL26	Q96S19	204 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	SERTAD4	Q9NUC0	356 aa		13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-208	ENST00000448611	APOH	P02749	345 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	LCNL1	Q6ZST4	164 aa		13.62	□□□□□ -0.23
LMNA-208	ENST00000448611		A0A0G2JLM5	398 aa		13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	GATC	O43716	136 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	CA1	P00915	261 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHV3-11	P01762	117 aa		13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	PRNT	Q86SH4	94 aa		13.62	□□□□□ -0.23
LMNA-208	ENST00000448611	CREBBP	Q92793	2442 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	MYO9A	B2RTY4	2548 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611		K7EQM0	130 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	HOXA3	O43365	443 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF207	O43670	478 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHG4	P01861	327 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	HOXA5	P20719	270 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	PSG3	Q16557	428 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	ARL6IP6	Q8N6S5	226 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	OR4X2	Q8NGF9	303 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF492	Q9P255	531 aa		13.61	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHV3-66	A0A0C4DH42	116 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	C19orf71	A6NCJ1	209 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	NDUFA4	O00483	81 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	AKR1D1	P51857	326 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611		Q71RC1	249 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	GRAMD2B	Q96HH9	432 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	PSG8	Q9UQ74	426 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	ITPR3	Q14573	2671 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	AKAP9	Q99996	3911 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHV3OR16-13	A0A075B7E8	117 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHV3-74	A0A0B4J1X5	117 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	SMAD7	O15105	426 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	PRB4	P10163	310 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	PSMB8	P28062	276 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	CSN1S1	P47710	185 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	TCL1A	P56279	114 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	UNQ9165/PRO28630	Q6UXU0	137 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	PRSS22	Q9GZN4	317 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	TRAPPC1	Q9Y5R8	145 aa		13.6	□□□□□ -0.23
LMNA-208	ENST00000448611	IGHV3-49	A0A0A0MS15	119 aa		13.59	□□□□□ -0.23
LMNA-208	ENST00000448611	SERTM2	A0A1B0GWG4	89 aa		13.59	□□□□□ -0.23
LMNA-208	ENST00000448611	CYSRT1	A8MQ03	144 aa		13.59	□□□□□ -0.23
LMNA-208	ENST00000448611	ZFP30	Q9Y2G7	519 aa		13.59	□□□□□ -0.23
LMNA-208	ENST00000448611	OTOG	Q6ZRI0	2925 aa		13.59	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF785	A8K8V0	405 aa		13.58	□□□□□ -0.23
LMNA-208	ENST00000448611	FRMD6-AS1	P0C7T7	363 aa		13.58	□□□□□ -0.23
LMNA-208	ENST00000448611	ZNF702P	Q9H963	129 aa		13.58	□□□□□ -0.23

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