RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 A0A1W2PPV4 95 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 TAS2R45P59539 299 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 GUK1Q16774 197 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 TENM2Q9NT68 2774 aa13.09□□□□□ -0.31
HLCS-205ENST00000448340 SACSQ9NZJ4 4579 aa13.08□□□□□ -0.31
HLCS-205ENST00000448340 H3BQ15 152 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
HLCS-205ENST00000448340 HIST1H1EP10412 219 aaKnown RBP13.08□□□□□ -0.32
HLCS-205ENST00000448340 TMEM41BQ5BJD5 291 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 RPP25LQ8N5L8 163 aaKnown RBP13.08□□□□□ -0.32
HLCS-205ENST00000448340 STOML3Q8TAV4 291 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 LINC00052Q96N35 136 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 OR51M1Q9H341 326 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 RPRMQ9NS64 109 aa13.08□□□□□ -0.32
HLCS-205ENST00000448340 TRAV8-2A0A0B4J237 113 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 PYYP10082 97 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
HLCS-205ENST00000448340 C4BPBP20851 252 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 LINC00322Q6ZN03 302 aaPredicted RBP13.07□□□□□ -0.32
HLCS-205ENST00000448340 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 U3KQK5 164 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 BIRC6Q9NR09 4857 aa13.07□□□□□ -0.32
HLCS-205ENST00000448340 SNRPCP09234 159 aaKnown RBP13.06□□□□□ -0.32
HLCS-205ENST00000448340 CDC34P49427 236 aaPredicted RBP13.06□□□□□ -0.32
HLCS-205ENST00000448340 ZNF124Q15973 351 aa13.06□□□□□ -0.32
HLCS-205ENST00000448340 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
HLCS-205ENST00000448340 SAT2Q96F10 170 aaPredicted RBP13.06□□□□□ -0.32
HLCS-205ENST00000448340 ACTR3CQ9C0K3 210 aaPredicted RBP13.06□□□□□ -0.32
HLCS-205ENST00000448340 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
HLCS-205ENST00000448340 HUWE1Q7Z6Z7 4374 aaKnown RBP13.05□□□□□ -0.32
HLCS-205ENST00000448340 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
HLCS-205ENST00000448340 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
HLCS-205ENST00000448340 OR7C2O60412 319 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 ZNF253O75346 499 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
HLCS-205ENST00000448340 PDE6HQ13956 83 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 RNF141Q8WVD5 230 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 FXYD5Q96DB9 178 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
HLCS-205ENST00000448340 DNAH7Q8WXX0 4024 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
HLCS-205ENST00000448340 C3orf84H3BNL1 204 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 H3BTX0 84 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 NBEAP1P0C6P0 100 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 RAB24Q969Q5 203 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 DNAH1Q9P2D7 4330 aa13.04□□□□□ -0.32
HLCS-205ENST00000448340 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 SLC17A3O00476 420 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLCS-205ENST00000448340 OR10J4P0C629 311 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
HLCS-205ENST00000448340 ACTL10Q5JWF8 245 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
HLCS-205ENST00000448340 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 BLNKQ8WV28 456 aa13.03□□□□□ -0.32
HLCS-205ENST00000448340 CTXND1A0A1B0GTU2 59 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 HMGB3O15347 200 aaKnown RBP13.02□□□□□ -0.33
HLCS-205ENST00000448340 NDUFB4O95168 129 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 NKX2-5P52952 324 aaPredicted RBP13.02□□□□□ -0.33
HLCS-205ENST00000448340 PSG9Q00887 426 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 PSG3Q16557 428 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 FOXI2Q6ZQN5 318 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 STHQ8IWL8 128 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 TMED6Q8WW62 240 aa13.02□□□□□ -0.33
HLCS-205ENST00000448340 SAV1Q9H4B6 383 aaPredicted RBP13.02□□□□□ -0.33
HLCS-205ENST00000448340 AGRNO00468 2067 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 ZNF726P1Q15940 193 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 HAGHQ16775 308 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 ZNF738Q8NE65 137 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 PLA2G2EQ9NZK7 142 aa13.01□□□□□ -0.33
HLCS-205ENST00000448340 KIR2DL5BA0A0G2JN68 375 aa13□□□□□ -0.33
HLCS-205ENST00000448340 KIR2DL5BA0A0G2JPC4 375 aa13□□□□□ -0.33
HLCS-205ENST00000448340 H3BMM0 161 aa13□□□□□ -0.33
HLCS-205ENST00000448340 CXorf1O96002 111 aa13□□□□□ -0.33
HLCS-205ENST00000448340 ARL14EPLP0DKL9 152 aa13□□□□□ -0.33
HLCS-205ENST00000448340 HLA-DRB4P13762 266 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms