RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SELENOKQ9Y6D0 94 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 NDUFC1O43677 76 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 ATAD5Q96QE3 1844 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 PRSS29PA6NIE9 313 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 LCN12Q6JVE5 192 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 LHFPL6Q9Y693 200 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
NIPBL-202ENST00000448238 TM4SF4P48230 202 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 Q6ZVH6 145 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 CRYGNQ8WXF5 182 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 DKK4Q9UBT3 224 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 COX8AP10176 69 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 DOT1LQ8TEK3 1739 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 CXCL10P02778 98 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 VWC2Q2TAL6 325 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 VN1R4Q7Z5H5 301 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 DSCAMO60469 2012 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 PLXNB2O15031 1838 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 IGHMP01871 453 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 IGLC2P0DOY2 106 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 IGLC3P0DOY3 106 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 NOVP48745 357 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 DSCR9P59020 149 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 ZNF236Q9UL36 1845 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 TCRBV5S1A1TA0A578 114 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 C15orf32Q32M92 178 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 COX14Q96I36 57 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 TMEM133Q9H2Q1 129 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 C17orf98A8MV24 154 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 F8VRH5 84 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 GREM1O60565 184 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 PSG7Q13046 419 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 HS3ST6Q96QI5 342 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-202ENST00000448238 TP53TG1Q9Y2A0 90 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-202ENST00000448238 PRB2P02812 416 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-202ENST00000448238 APOC4P55056 127 aa7.37□□□□□ -1.23
NIPBL-202ENST00000448238 RREB1Q92766 1687 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 PTPRFP10586 1907 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV3OR16-8A0A075B7F1 116 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 RPL34P49207 117 aaKnown RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 DEFB105AQ8NG35 78 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV3OR16-10A0A075B7F0 116 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 MRPL14Q6P1L8 145 aaKnown RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 F5H768 121 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 ZNF503Q96F45 646 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 SPSB2Q99619 263 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 OOSP1A8MZH6 123 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 ETV2O00321 342 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 COL9A3Q14050 684 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-202ENST00000448238 ACANP16112 2415 aa7.36□□□□□ -1.23
NIPBL-202ENST00000448238 ARFGEF1Q9Y6D6 1849 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 OBSL1O75147 1896 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 A6NED7 52 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 FAM223BA6NKX1 122 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 CFHR1Q03591 330 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 Q0VG73 95 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 C2CD4DB7Z1M9 353 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 SH2D1AO60880 128 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 SRSF8Q9BRL6 282 aaKnown RBP7.35□□□□□ -1.23
NIPBL-202ENST00000448238 ARAP2Q8WZ64 1704 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 PRSS47A8MTI9 375 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 LIMS1P48059 325 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 RNF5Q99942 180 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 FAM60AQ9NP50 221 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 PIK3C2AO00443 1686 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 EXPH5Q8NEV8 1989 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV1OR15-9A0A0B4J2B8 117 aa7.35□□□□□ -1.23
NIPBL-202ENST00000448238 A0A1B0GTL3 188 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 TMEM256-PLSCR3K7ERE1 68 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.23
NIPBL-202ENST00000448238 LGALS9BQ3B8N2 356 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 LGALS9CQ6DKI2 356 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 TMEM256Q8N2U0 113 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 SAA2-SAA4A0A096LPE2 208 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 SAA2P0DJI9 122 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-202ENST00000448238 LINC00271P0C7V0 271 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 C18orf12Q96KH6 178 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 MINOS1Q5TGZ0 78 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 C10orf105Q8TEF2 133 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 MINOS1-NBL1R4GNA1 71 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 NSUN5P1Q3KNT7 163 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 C2orf66Q6UXQ4 117 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 BTAF1O14981 1849 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 IGHV3-53P01767 116 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 FOXE3Q13461 319 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
NIPBL-202ENST00000448238 PARP14Q460N5 1801 aa7.34□□□□□ -1.24
NIPBL-202ENST00000448238 A0A1B0GTI1 187 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms