RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 M6PRP20645 277 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 GDF5OSQ5U4N7 250 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 S100A7AQ86SG5 101 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 OR10G4Q8NGN3 311 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 OR10G9Q8NGN4 311 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 OR10G7Q8NGN6 311 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 GNPNAT1Q96EK6 184 aaPredicted RBP9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 HYLS1Q96M11 299 aa9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
HLA-DOB-207ENST00000447394 OR7C2O60412 319 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 PSMB3P49720 205 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 RHOBP62745 196 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 TMEM41BQ5BJD5 291 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 BLNKQ8WV28 456 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 RPRMQ9NS64 109 aa9.8□□□□□ -0.84
HLA-DOB-207ENST00000447394 ISLRO14498 428 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 SPP1P10451 314 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 CDC34P49427 236 aaPredicted RBP9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 MEOX2P50222 304 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 ZNF726P1Q15940 193 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 ACTL10Q5JWF8 245 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 LINC00322Q6ZN03 302 aaPredicted RBP9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 FXYD5Q96DB9 178 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 FAM110AQ9BQ89 295 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 PAXXQ9BUH6 204 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 RETNQ9HD89 108 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
HLA-DOB-207ENST00000447394 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 A8MZ25 164 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 NDUFB4O95168 129 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 ZNF705DP0CH99 300 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 ZNF705BP0CI00 300 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 ID1P41134 155 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 FHITP49789 147 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 UBE2L3P68036 154 aaKnown RBP9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 SERF2P84101 59 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 HAGHQ16775 308 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 KHDC3LQ587J8 217 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 SAT2Q96F10 170 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 OR51M1Q9H341 326 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 HRH4Q9H3N8 390 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 COL7A1Q02388 2944 aa9.78□□□□□ -0.84
HLA-DOB-207ENST00000447394 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 ZNF705FA8MVS1 300 aaPredicted RBP9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 BOLA2-SMG1P6H3BVE0 249 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 IGKV3-20P01619 116 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 ARL14EPLP0DKL9 152 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 HIST1H1EP10412 219 aaKnown RBP9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 EXOC3-AS1Q8N2X6 119 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 RNF141Q8WVD5 230 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 TMED6Q8WW62 240 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 RNF24Q9Y225 148 aa9.77□□□□□ -0.85
HLA-DOB-207ENST00000447394 LOC102724200A0A096LPH7 203 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 TPT1P13693 172 aaKnown RBP9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 CMC4P56277 68 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 BAP18Q8IXM2 172 aa9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 STOML3Q8TAV4 291 aa9.76□□□□□ -0.85
HLA-DOB-207ENST00000447394 TENM3Q9P273 2699 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 M0R3E3 92 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 MBP02144 154 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 STAG3L3P0CL85 134 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 C4BPBP20851 252 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 FGF8P55075 233 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 FXYD7P58549 80 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 TAS2R45P59539 299 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 PSG3Q16557 428 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 STHQ8IWL8 128 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 SLC50A1Q9BRV3 221 aa9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 ACTR3CQ9C0K3 210 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 SAV1Q9H4B6 383 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOB-207ENST00000447394 A0A0J9YX75 114 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 A0A1B0GV50 99 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 H3BMM0 161 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 SEC11BP0C7V7 166 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 HLA-DRB4P13762 266 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 ICAM4Q14773 271 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 GUK1Q16774 197 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 SAMD13Q5VXD3 122 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 FOXI2Q6ZQN5 318 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 IQCF2Q8IXL9 164 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 TMPRSS5Q9H3S3 457 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms