RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 U3KQK5 164 aa15.02■□□□□ -0
SDCBP-204ENST00000447182 H0Y8G0 127 aa15.02□□□□□ -0.01
SDCBP-204ENST00000447182 IL4P05112 153 aa15.02□□□□□ -0.01
SDCBP-204ENST00000447182 DPF1Q92782 380 aa15.02□□□□□ -0.01
SDCBP-204ENST00000447182 RAB1BQ9H0U4 201 aa15.02□□□□□ -0.01
SDCBP-204ENST00000447182 DMXL1Q9Y485 3027 aa15.02□□□□□ -0.01
SDCBP-204ENST00000447182 SERTM2A0A1B0GWG4 89 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 TIMM23O14925 209 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 CD5LO43866 347 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 CT45A10P0DMU9 189 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 ARF6P62330 175 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 BSNQ9UPA5 3926 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 CDKN1BP46527 198 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 Q8NA96 180 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 ABHD17AQ96GS6 310 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 ASCL2Q99929 193 aa15.01□□□□□ -0.01
SDCBP-204ENST00000447182 M0R3E3 92 aa15□□□□□ -0.01
SDCBP-204ENST00000447182 FCGR2BP31994 310 aaPredicted RBP15□□□□□ -0.01
SDCBP-204ENST00000447182 GPR183P32249 361 aa15□□□□□ -0.01
SDCBP-204ENST00000447182 COX8CQ7Z4L0 72 aa15□□□□□ -0.01
SDCBP-204ENST00000447182 ZNF48Q96MX3 618 aaPredicted RBP15□□□□□ -0.01
SDCBP-204ENST00000447182 A0A096LNJ9 63 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 LYNX1G3V0Z9 82 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 NBR2O15453 112 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 LYNX1P0DP58 116 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 LDLRAD2Q5SZI1 272 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 NPBQ8NG41 125 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 C8orf49Q96NF6 230 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 AAMDCQ9H7C9 122 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 NDUFA3O95167 84 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 CD3EP07766 207 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 FAM104BQ5XKR9 115 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 C2orf91Q6ZV80 131 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 ARL6IP6Q8N6S5 226 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 ADGRG4Q8IZF6 3080 aa14.99□□□□□ -0.01
SDCBP-204ENST00000447182 A0A087X0K7 114 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 NCR2O95944 276 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 IFI27P40305 119 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-204ENST00000447182 LY6G5BQ8NDX9 201 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 TIMM8BQ9Y5J9 83 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-204ENST00000447182 OR2T8A6NH00 312 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 LYZL1Q6UWQ5 148 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 CFHR4Q92496 578 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 TPPP3Q9BW30 176 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 SIGLEC8Q9NYZ4 499 aa14.98□□□□□ -0.01
SDCBP-204ENST00000447182 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.97□□□□□ -0.01
SDCBP-204ENST00000447182 TMEM189A5PLL7 270 aa14.97□□□□□ -0.01
SDCBP-204ENST00000447182 D6R8Y8 96 aa14.97□□□□□ -0.01
SDCBP-204ENST00000447182 GNG7O60262 68 aa14.97□□□□□ -0.01
SDCBP-204ENST00000447182 POLEQ07864 2286 aa14.97□□□□□ -0.01
SDCBP-204ENST00000447182 FAM106CPP0CH98 169 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 FAM106AQ4KMX7 169 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 ORMDL3Q8N138 153 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 OR11H6Q8NGC7 330 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 PRELID3AQ96N28 172 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 DPM3Q9P2X0 92 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 ZZEF1O43149 2961 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 SH2D1AO60880 128 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 PSG9Q00887 426 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 C21orf62-AS1Q17RA5 79 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 LGALS9BQ3B8N2 356 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 LGALS9CQ6DKI2 356 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 OR1N2Q8NGR9 330 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 ONECUT1Q9UBC0 465 aa14.96□□□□□ -0.01
SDCBP-204ENST00000447182 IGLV11-55A0A075B6I3 123 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 FBLL1A6NHQ2 334 aaKnown RBP14.95□□□□□ -0.02
SDCBP-204ENST00000447182 NPIPB5A8MRT5 1133 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 FGF6P10767 208 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 MFAP4P55083 255 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 LOXL1Q08397 574 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-204ENST00000447182 BCL6BQ8N143 479 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-204ENST00000447182 TTC28Q96AY4 2481 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 KALRNO60229 2985 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 TMEM213A2RRL7 107 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 SEC11AP67812 179 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 PAX8Q06710 450 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 SAPCD1Q5SSQ6 148 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 ERASQ7Z444 233 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SDCBP-204ENST00000447182 ANKRD11Q6UB99 2663 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-204ENST00000447182 DMXL2Q8TDJ6 3036 aa14.94□□□□□ -0.02
SDCBP-204ENST00000447182 ZNF318Q5VUA4 2279 aa14.94□□□□□ -0.02
SDCBP-204ENST00000447182 CBY3A6NI87 242 aa14.94□□□□□ -0.02
SDCBP-204ENST00000447182 F8W735 103 aaPredicted RBP14.94□□□□□ -0.02
SDCBP-204ENST00000447182 KLF17Q5JT82 389 aaPredicted RBP14.94□□□□□ -0.02
SDCBP-204ENST00000447182 AMMECR1LQ6DCA0 310 aa14.94□□□□□ -0.02
SDCBP-204ENST00000447182 AMN1Q8IY45 258 aa14.94□□□□□ -0.02
SDCBP-204ENST00000447182 PEF1Q9UBV8 284 aaKnown RBP14.94□□□□□ -0.02
SDCBP-204ENST00000447182 APC2O95996 2303 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 PRB4P10163 310 aaPredicted RBP14.93□□□□□ -0.02
SDCBP-204ENST00000447182 CEACAM3P40198 252 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 C5orf64Q2M2E5 130 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 ACACAQ13085 2346 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 LOC389332A0A1B0GUA5 103 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 MRPL51Q4U2R6 128 aaKnown RBP14.93□□□□□ -0.02
SDCBP-204ENST00000447182 OR8A1Q8NGG7 326 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 PRR25Q96S07 402 aa14.93□□□□□ -0.02
SDCBP-204ENST00000447182 ZNF672Q499Z4 452 aaPredicted RBP14.92□□□□□ -0.02
SDCBP-204ENST00000447182 ANKRD39Q53RE8 183 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms