RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 CYB5AP00167 134 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 UCHL1P09936 223 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 IGHV3-43DP0DP04 118 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 ZNF93P35789 620 aaPredicted RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 HBG1P69891 147 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 HBG2P69892 147 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 BATFQ16520 125 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 TMEM69Q5SWH9 247 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 SPATA31B1PQ5VZV4 182 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 TEX261Q6UWH6 196 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 HSD17B13Q7Z5P4 300 aaPredicted RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 SAXO1Q8IYX7 474 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 UQCC1Q9NVA1 299 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 FN1P02751 2386 aaKnown RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 NIPBLQ6KC79 2804 aaeCLIP4.62□□□□□ -1.67
MCF2-206ENST00000446225 A0A087WXM4 84 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 RBFOX3A6NFN3 312 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 EPM2AB3EWF7 344 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 H0Y9J4 135 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 BLVRBP30043 206 aaPredicted RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 MORN2Q502X0 79 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 HSD17B12Q53GQ0 312 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 LYPD6Q86Y78 171 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 TP53RKQ96S44 253 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 NDUFB11Q9NX14 153 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 OR5V1Q9UGF6 321 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 TRAPPC2LQ9UL33 140 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 YTHDF2Q9Y5A9 579 aaKnown RBP4.62□□□□□ -1.67
MCF2-206ENST00000446225 INSIG2Q9Y5U4 225 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 RFNGQ9Y644 331 aa4.62□□□□□ -1.67
MCF2-206ENST00000446225 TRDV1A0A1B0GX56 115 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 HIST1H1BP16401 226 aaKnown RBP4.61□□□□□ -1.67
MCF2-206ENST00000446225 RPL7P18124 248 aaKnown RBP4.61□□□□□ -1.67
MCF2-206ENST00000446225 TAS2R46P59540 309 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 PAX8Q06710 450 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 LRRC10Q5BKY1 277 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 Q6P435 159 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 GLIPR1L1Q6UWM5 242 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 Q8IYB0 196 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 H1FXQ92522 213 aaKnown RBP4.61□□□□□ -1.67
MCF2-206ENST00000446225 VSIG2Q96IQ7 327 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 NDFIP1Q9BT67 221 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 TMEM70Q9BUB7 260 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 TMPRSS5Q9H3S3 457 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 CST9LQ9H4G1 147 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 MRPL16Q9NX20 251 aaKnown RBP4.61□□□□□ -1.67
MCF2-206ENST00000446225 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
MCF2-206ENST00000446225 SVEP1Q4LDE5 3571 aa4.61□□□□□ -1.67
MCF2-206ENST00000446225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.61□□□□□ -1.67
MCF2-206ENST00000446225 NF1P21359 2839 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZNF737O75373 536 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ARL6IP5O75915 188 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 FGF7P21781 194 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 EVI2AP22794 236 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 SRIP30626 198 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 H2BFSP57053 126 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 FGF12P61328 243 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 HIST1H1AQ02539 215 aaPredicted RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 PIGYQ3MUY2 71 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 LY6G5BQ8NDX9 201 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 OR4S1Q8NGB4 309 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 GALNT14Q96FL9 552 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 TMEM101Q96IK0 257 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 LPAR5Q9H1C0 372 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZNF581Q9P0T4 197 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 RPUSD1Q9UJJ7 312 aaKnown RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 LAMTOR2Q9Y2Q5 125 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 F11RQ9Y624 299 aaKnown RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 TRAV8-2A0A0B4J237 113 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 OR2H2O95918 312 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 IGHG2P01859 326 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 LGALS1P09382 135 aaKnown RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 AZU1P20160 251 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZBTB25P24278 435 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 GADD45AP24522 165 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZNF138P52744 262 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 CAV3P56539 151 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 PRB3Q04118 309 aaPredicted RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 FCN2Q15485 313 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 TTC32Q5I0X7 151 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 COA6Q5JTJ3 125 aaKnown RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 GLT8D1Q68CQ7 371 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 ZNF493Q6ZR52 646 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 C9orf62Q8N4C0 152 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 C12orf45Q8N5I9 185 aaPredicted RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 OR1L1Q8NH94 360 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 PLEKHB2Q96CS7 222 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 C1orf147Q96MC9 270 aaPredicted RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 S100A13Q99584 98 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 CHST6Q9GZX3 395 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 BANF2Q9H503 90 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 TXNL4BQ9NX01 149 aaKnown RBP4.6□□□□□ -1.67
MCF2-206ENST00000446225 NAT8BQ9UHF3 227 aa4.6□□□□□ -1.67
MCF2-206ENST00000446225 WNK2Q9Y3S1 2297 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms