RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 A8MWV9 139 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 IGKCP01834 107 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 ID3Q02535 119 aa9.55□□□□□ -0.88
FN1-212ENST00000446046 MDKP21741 143 aaPredicted RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 DLX4Q92988 240 aaPredicted RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 F5H768 121 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 SRSF6Q13247 344 aaKnown RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 PIEZO1Q92508 2521 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 IGKV2-40A0A087WW87 121 aaPredicted RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 MPTX1A8MV57 137 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 IGKV2D-40P01614 121 aaPredicted RBP9.54□□□□□ -0.88
FN1-212ENST00000446046 Q6P435 159 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 SCRT1Q9BWW7 348 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 FOXL1Q12952 345 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 C1QTNF9P0C862 333 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 WDR83OSQ9Y284 106 aa9.54□□□□□ -0.88
FN1-212ENST00000446046 EVI2AP22794 236 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 CFHR2P36980 270 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 ZNF876PQ49A33 203 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 TMEM158Q8WZ71 300 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 PYYP10082 97 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 H3BUA1 57 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 PAX4O43316 350 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 PNRC2Q9NPJ4 139 aaKnown RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 MGST2Q99735 147 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 TRPT1Q86TN4 253 aaKnown RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 WISP1O95388 367 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 ZNF329Q86UD4 541 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
FN1-212ENST00000446046 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
FN1-212ENST00000446046 LYPD3O95274 346 aa9.52□□□□□ -0.88
FN1-212ENST00000446046 MST1LQ2TV78 715 aa9.52□□□□□ -0.88
FN1-212ENST00000446046 NOTCH2Q04721 2471 aa9.52□□□□□ -0.88
FN1-212ENST00000446046 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.89
FN1-212ENST00000446046 IGKV1D-17A0A075B6S4 117 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 CD300CQ08708 224 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 C9orf66Q5T8R8 295 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 NDUFA4O00483 81 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 ATXN8Q156A1 80 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
FN1-212ENST00000446046 A0A0A6YYD4 124 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 TRAV1-1A0A0B4J248 108 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 NDPQ00604 133 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 C1orf122Q6ZSJ8 110 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 DDTP30046 118 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 DEFB113Q30KQ7 82 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 PARD6GQ9BYG4 376 aaPredicted RBP9.51□□□□□ -0.89
FN1-212ENST00000446046 FGF16O43320 207 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 ELANEP08246 267 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 MBD3L1Q8WWY6 194 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 ZNF319Q9P2F9 582 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 SRSF4Q08170 494 aaKnown RBP9.51□□□□□ -0.89
FN1-212ENST00000446046 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
FN1-212ENST00000446046 TRAV2A0A0B4J234 112 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 VPREB3Q9UKI3 123 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 LOC102724200A0A096LPH7 203 aaPredicted RBP9.5□□□□□ -0.89
FN1-212ENST00000446046 MYMXA0A1B0GTQ4 84 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 FOXL2NBQ6ZUU3 175 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 DEFB130BP0DP73 79 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 DEFB130AP0DP74 79 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 LYPD2Q6UXB3 125 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 MRPL27Q9P0M9 148 aaKnown RBP9.5□□□□□ -0.89
FN1-212ENST00000446046 CLPSP04118 112 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 CGB3P0DN86 165 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 DEFB131AP59861 70 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 RNF126Q9BV68 326 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 YPEL3P61236 119 aaPredicted RBP9.5□□□□□ -0.89
FN1-212ENST00000446046 C5orf30Q96GV9 206 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
FN1-212ENST00000446046 HGFACQ04756 655 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 SELLP14151 372 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 CLDN16Q9Y5I7 305 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 IFITM3Q01628 133 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 TMEM249Q2WGJ8 235 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 LIME1Q9H400 295 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 F8VVB4 439 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 F8VWA3 439 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 LMO1P25800 156 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 C1QL4Q86Z23 238 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
FN1-212ENST00000446046 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms