RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 NDUFS7O75251 213 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
VPS52-212ENST00000445902 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 TRGV9Q99603 122 aa11.07□□□□□ -0.64
VPS52-212ENST00000445902 M0R296 226 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 NPYP01303 97 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 CNTFRP26992 372 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
VPS52-212ENST00000445902 PSG8Q9UQ74 426 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 TRIOBPQ9H2D6 2365 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 SIVA1O15304 175 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 RBP4P02753 201 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
VPS52-212ENST00000445902 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 VGLL1Q99990 258 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 CHAC1Q9BUX1 264 aa11.06□□□□□ -0.64
VPS52-212ENST00000445902 FTH1P19P0C7X4 201 aa11.05□□□□□ -0.64
VPS52-212ENST00000445902 DLX1P56177 255 aa11.05□□□□□ -0.64
VPS52-212ENST00000445902 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
VPS52-212ENST00000445902 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 H3BMG7 143 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 CKS2P33552 79 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 BMI1P35226 326 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 CCL8P80075 99 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 FAM104BQ5XKR9 115 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 GTSCR1Q86UQ5 136 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 INS-IGF2F8WCM5 200 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 CRYGCP07315 174 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
VPS52-212ENST00000445902 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 A0A1B0GV72 72 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 RAB9AP51151 201 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 INSL3P51460 131 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 TMEM178AQ8NBL3 297 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
VPS52-212ENST00000445902 ZNF71Q9NQZ8 489 aaPredicted RBP11.04□□□□□ -0.64
VPS52-212ENST00000445902 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
VPS52-212ENST00000445902 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
VPS52-212ENST00000445902 POLEQ07864 2286 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 WI2-2373I1.2A0A1W2PRP0 233 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 WT1P19544 449 aaPredicted RBP11.03□□□□□ -0.64
VPS52-212ENST00000445902 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 TM4SF5O14894 197 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 ATP5G2Q06055 141 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 LCNL1Q6ZST4 164 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 LINC00312Q9Y6C7 94 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 S4R3C0 116 aa11.03□□□□□ -0.64
VPS52-212ENST00000445902 PCNX1Q96RV3 2341 aa11.02□□□□□ -0.64
VPS52-212ENST00000445902 C16orf97H3BN30 126 aa11.02□□□□□ -0.64
VPS52-212ENST00000445902 PRSS1P07477 247 aa11.02□□□□□ -0.64
VPS52-212ENST00000445902 CT45A10P0DMU9 189 aa11.02□□□□□ -0.64
VPS52-212ENST00000445902 TWIST1Q15672 202 aa11.02□□□□□ -0.64
VPS52-212ENST00000445902 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.64
VPS52-212ENST00000445902 FCN3O75636 299 aa11.02□□□□□ -0.65
VPS52-212ENST00000445902 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
VPS52-212ENST00000445902 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 HOXB4P17483 251 aaPredicted RBP11.01□□□□□ -0.65
VPS52-212ENST00000445902 EVI2AP22794 236 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 CEACAM3P40198 252 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
VPS52-212ENST00000445902 PAX8Q06710 450 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 TMEM200BQ69YZ2 307 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 PHLDA1Q8WV24 401 aaPredicted RBP11.01□□□□□ -0.65
VPS52-212ENST00000445902 FER1L6-AS2Q96M78 137 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 LINC00574Q9H8X3 128 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 NGBQ9NPG2 151 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 TECTAO75443 2155 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 TRBV19A0A075B6N1 114 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 A0A1B0GW15 77 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 FCER1GP30273 86 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 LEPP41159 167 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 CKS1BP61024 79 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
VPS52-212ENST00000445902 LAMA5O15230 3695 aa11□□□□□ -0.65
VPS52-212ENST00000445902 K7EQM0 130 aa11□□□□□ -0.65
VPS52-212ENST00000445902 PPIFP30405 207 aaKnown RBP11□□□□□ -0.65
VPS52-212ENST00000445902 SIGLEC15Q6ZMC9 328 aa11□□□□□ -0.65
VPS52-212ENST00000445902 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
VPS52-212ENST00000445902 SMPXQ9UHP9 88 aa11□□□□□ -0.65
VPS52-212ENST00000445902 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
VPS52-212ENST00000445902 ZGRF1Q86YA3 2104 aa11□□□□□ -0.65
VPS52-212ENST00000445902 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
VPS52-212ENST00000445902 SH2D1AO60880 128 aa11□□□□□ -0.65
VPS52-212ENST00000445902 GLRXP35754 106 aa11□□□□□ -0.65
VPS52-212ENST00000445902 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
VPS52-212ENST00000445902 ZNF479Q96JC4 524 aa11□□□□□ -0.65
VPS52-212ENST00000445902 FOXC2Q99958 501 aa11□□□□□ -0.65
VPS52-212ENST00000445902 PLSCR4Q9NRQ2 329 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms