RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 STPG3Q8N7X2 389 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 STXBP6Q8NFX7 210 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 SMIM3Q9BZL3 60 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 WDR83OSQ9Y284 106 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 FGF7P21781 194 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 PEA15Q15121 130 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 SLC25A22Q9H936 323 aa13.48□□□□□ -0.25
LRCH1-204ENST00000443945 HYPMO75409 117 aa13.47□□□□□ -0.25
LRCH1-204ENST00000443945 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
LRCH1-204ENST00000443945 HELTA6NFD8 242 aa13.46□□□□□ -0.25
LRCH1-204ENST00000443945 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.25
LRCH1-204ENST00000443945 GLMPQ8WWB7 406 aa13.46□□□□□ -0.25
LRCH1-204ENST00000443945 MEOX2P50222 304 aa13.46□□□□□ -0.26
LRCH1-204ENST00000443945 SIGLEC15Q6ZMC9 328 aa13.46□□□□□ -0.26
LRCH1-204ENST00000443945 LINC00322Q6ZN03 302 aaPredicted RBP13.46□□□□□ -0.26
LRCH1-204ENST00000443945 Q6ZRG5 221 aa13.46□□□□□ -0.26
LRCH1-204ENST00000443945 RETNQ9HD89 108 aa13.46□□□□□ -0.26
LRCH1-204ENST00000443945 FBXL17Q9UF56 701 aa13.46□□□□□ -0.26
LRCH1-204ENST00000443945 NHLRC4P0CG21 123 aaPredicted RBP13.45□□□□□ -0.26
LRCH1-204ENST00000443945 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 LEMD1Q68G75 181 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 SFT2D1Q8WV19 159 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 UHRF2Q96PU4 802 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 ARV1Q9H2C2 271 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 U3KQK5 164 aa13.45□□□□□ -0.26
LRCH1-204ENST00000443945 COLCA2A8K830 154 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 S100A7P31151 101 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 ATP5SQ99766 215 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 GGTLC1Q9BX51 225 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 MAP6D1Q9H9H5 199 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 C9JQL5 133 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 LYPD6BQ8NI32 183 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 TM2D3Q9BRN9 247 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 SLC25A39Q9BZJ4 359 aaPredicted RBP13.44□□□□□ -0.26
LRCH1-204ENST00000443945 SMCO4Q9NRQ5 59 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 PLA2G2EQ9NZK7 142 aa13.44□□□□□ -0.26
LRCH1-204ENST00000443945 MPDU1O75352 247 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 RCHY1Q96PM5 261 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 NPCDR1Q9BY65 106 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 BORCS7-ASMTA0A0B4J1R7 106 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 COX7A2P2O60397 106 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 IFNA5P01569 189 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 SEC11BP0C7V7 166 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 RPL35AP18077 110 aaKnown RBP13.43□□□□□ -0.26
LRCH1-204ENST00000443945 DEFB131AP59861 70 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 PLP1P60201 277 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 S100A7AQ86SG5 101 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 DCANP1Q8TF63 244 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
LRCH1-204ENST00000443945 ZNF688P0C7X2 276 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 RPL29P47914 159 aaKnown RBP13.42□□□□□ -0.26
LRCH1-204ENST00000443945 RAB5BP61020 215 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 S100A12P80511 92 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 WDR61Q9GZS3 305 aaKnown RBP13.42□□□□□ -0.26
LRCH1-204ENST00000443945 SLC39A9Q9NUM3 307 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
LRCH1-204ENST00000443945 K7EQG2 157 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 EIF3GO75821 320 aaKnown RBP eCLIP13.41□□□□□ -0.26
LRCH1-204ENST00000443945 SNRPEP62304 92 aaKnown RBP13.41□□□□□ -0.26
LRCH1-204ENST00000443945 C15orf54Q8N8G6 183 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 ELOA3CA0A087WX78 387 aaPredicted RBP13.41□□□□□ -0.26
LRCH1-204ENST00000443945 AKR1C3P42330 323 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 PRR20EP86478 221 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 PRR20CP86479 221 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 PRR20DP86480 221 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 PRR20BP86481 221 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 PRR20AP86496 221 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 SHANK2-AS3Q9BTD1 123 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 DNAJC4Q9NNZ3 241 aa13.41□□□□□ -0.26
LRCH1-204ENST00000443945 LOC102724200A0A096LPH7 203 aaPredicted RBP13.4□□□□□ -0.26
LRCH1-204ENST00000443945 RAB5CP51148 216 aa13.4□□□□□ -0.26
LRCH1-204ENST00000443945 RPS10P5Q9NQ39 176 aa13.4□□□□□ -0.26
LRCH1-204ENST00000443945 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 H3BRN7 92 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 GALR1P47211 349 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 PPT1P50897 306 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 RSG1Q9BU20 258 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 WFDC1Q9HC57 220 aa13.4□□□□□ -0.27
LRCH1-204ENST00000443945 C17orf112F2Z3M2 114 aa13.39□□□□□ -0.27
LRCH1-204ENST00000443945 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
LRCH1-204ENST00000443945 OR1L4Q8NGR5 311 aa13.39□□□□□ -0.27
LRCH1-204ENST00000443945 SPXQ9BT56 116 aa13.39□□□□□ -0.27
LRCH1-204ENST00000443945 AGRNO00468 2067 aa13.39□□□□□ -0.27
LRCH1-204ENST00000443945 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
LRCH1-204ENST00000443945 COTL1Q14019 142 aa13.38□□□□□ -0.27
LRCH1-204ENST00000443945 HIST1H2BAQ96A08 127 aa13.38□□□□□ -0.27
LRCH1-204ENST00000443945 PFDN5Q99471 154 aa13.38□□□□□ -0.27
LRCH1-204ENST00000443945 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms