RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 HOXA5P20719 270 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 LINC00315P59091 139 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 RAB11AP62491 216 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 RHOBP62745 196 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 HIST1H1AQ02539 215 aaPredicted RBP14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 Q5VSD8 79 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 LINC00612Q8N6U2 182 aa14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-202ENST00000443430 TMEM128Q5BJH2 165 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 TRIQKQ629K1 86 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 OR8A1Q8NGG7 326 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 OR1S1Q8NH92 325 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 TMEM147Q9BVK8 224 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 SRRQ9GZT4 340 aa14.28□□□□□ -0.12
POLR2J3-202ENST00000443430 IAPPP10997 89 aa14.27□□□□□ -0.13
POLR2J3-202ENST00000443430 BPIFCQ8NFQ6 507 aa14.27□□□□□ -0.13
POLR2J3-202ENST00000443430 SLC25A21Q9BQT8 299 aaPredicted RBP14.27□□□□□ -0.13
POLR2J3-202ENST00000443430 PPP1R14DQ9NXH3 145 aa14.27□□□□□ -0.13
POLR2J3-202ENST00000443430 PAIP2BQ9ULR5 123 aaKnown RBP14.27□□□□□ -0.13
POLR2J3-202ENST00000443430 LINC00854A0A1B0GVQ3 168 aa14.26□□□□□ -0.13
POLR2J3-202ENST00000443430 PITX3O75364 302 aa14.26□□□□□ -0.13
POLR2J3-202ENST00000443430 DEDD2Q8WXF8 326 aa14.26□□□□□ -0.13
POLR2J3-202ENST00000443430 FRZBQ92765 325 aa14.26□□□□□ -0.13
POLR2J3-202ENST00000443430 PTTG2Q9NZH5 202 aa14.26□□□□□ -0.13
POLR2J3-202ENST00000443430 PIGBOS1A0A0B4J2F0 54 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 PRSS46E5RG02 174 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 H3BNG1 76 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 H3BRN7 92 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 PRB4P10163 310 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 CXCL3P19876 107 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 S100A7P31151 101 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 CDKN1BP46527 198 aa14.25□□□□□ -0.13
POLR2J3-202ENST00000443430 DUXBA0A1W2PPF3 345 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 GAGE12BA1L429 117 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 H7BYZ3 331 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 ADAP1O75689 374 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 GAGE7O76087 117 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 GAGE12FP0CL80 117 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 GAGE12GP0CL81 117 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 GAGE12IP0CL82 117 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 PPP1R1AQ13522 171 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 BAK1Q16611 211 aa14.24□□□□□ -0.13
POLR2J3-202ENST00000443430 SRRM2Q9UQ35 2752 aaKnown RBP14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 SFT2D2O95562 160 aa14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 KIR3DS1Q14943 382 aa14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 PSG3Q16557 428 aa14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 CDPF1Q6NVV7 123 aa14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 SHANK2-AS3Q9BTD1 123 aa14.23□□□□□ -0.13
POLR2J3-202ENST00000443430 HOXB5P09067 269 aa14.22□□□□□ -0.13
POLR2J3-202ENST00000443430 RPL7P18124 248 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-202ENST00000443430 A0A087X0K7 114 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 A0A096LPF7 62 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 NAP1L6A6NFF2 107 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 EREGO14944 169 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 RLN2P04090 185 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 KRTAP10-1P60331 282 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 LRTM2Q8N967 370 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 C20orf144Q9BQM9 153 aa14.21□□□□□ -0.13
POLR2J3-202ENST00000443430 ERVFC1-1P60608 527 aa14.2□□□□□ -0.14
POLR2J3-202ENST00000443430 RPUSD4Q96CM3 377 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-202ENST00000443430 VSIG2Q96IQ7 327 aa14.2□□□□□ -0.14
POLR2J3-202ENST00000443430 FLVCR2Q9UPI3 526 aa14.2□□□□□ -0.14
POLR2J3-202ENST00000443430 HIGD1AQ9Y241 93 aa14.2□□□□□ -0.14
POLR2J3-202ENST00000443430 NDUFB6O95139 128 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 RAP2BP61225 183 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 AKR1C1Q04828 323 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 CCDC28AQ8IWP9 274 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 CIB3Q96Q77 187 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 SDHCQ99643 169 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 PARD6GQ9BYG4 376 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 TMPRSS5Q9H3S3 457 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 NDUFA13Q9P0J0 144 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 MDFICQ9P1T7 246 aa14.19□□□□□ -0.14
POLR2J3-202ENST00000443430 CENPXA8MT69 81 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 WRBO00258 174 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 SIVA1O15304 175 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 MED6O75586 246 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 SLC25A6P12236 298 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 UBE2MP61081 183 aaKnown RBP14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 RPP30P78346 268 aaKnown RBP14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 CYP2G1PQ6ZSU1 146 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 ACOT7LQ6ZUV0 252 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 LRRC20Q8TCA0 184 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 TNFRSF18Q9Y5U5 241 aa14.18□□□□□ -0.14
POLR2J3-202ENST00000443430 C9orf170A2RU37 121 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 HYPMO75409 117 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 SMR3BP02814 79 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 IL5P05113 134 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 IL7P13232 177 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 PLP1P60201 277 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 GFI1BQ5VTD9 330 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 C18orf15Q96N68 181 aa14.17□□□□□ -0.14
POLR2J3-202ENST00000443430 MRPS12O15235 138 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 SYNGR2O43760 224 aa14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 IFNA5P01569 189 aa14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 OR5G3P0C626 314 aa14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 SPANXN5Q5MJ07 72 aa14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 Q6ZTI0 123 aa14.16□□□□□ -0.14
POLR2J3-202ENST00000443430 OR4E1P0C645 316 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms