RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PSMG3Q9BT73 122 aaPredicted RBP11.79□□□□□ -0.52
USP39-205ENST00000442708 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
USP39-205ENST00000442708 F6UB75 175 aa11.78□□□□□ -0.52
USP39-205ENST00000442708 TAAR5O14804 337 aa11.78□□□□□ -0.52
USP39-205ENST00000442708 M6PRP20645 277 aa11.78□□□□□ -0.52
USP39-205ENST00000442708 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
USP39-205ENST00000442708 TRPT1Q86TN4 253 aaKnown RBP11.78□□□□□ -0.52
USP39-205ENST00000442708 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
USP39-205ENST00000442708 MRPL32Q9BYC8 188 aaKnown RBP11.78□□□□□ -0.52
USP39-205ENST00000442708 HRH4Q9H3N8 390 aa11.78□□□□□ -0.52
USP39-205ENST00000442708 ZNF331Q9NQX6 463 aaPredicted RBP11.78□□□□□ -0.52
USP39-205ENST00000442708 A0A0D9SG52 128 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 H3BMM0 161 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 NDUFB4O95168 129 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 C1QBP02746 253 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 NHLRC4P0CG21 123 aaPredicted RBP11.77□□□□□ -0.53
USP39-205ENST00000442708 STHQ8IWL8 128 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 ARPC5LQ9BPX5 153 aa11.77□□□□□ -0.53
USP39-205ENST00000442708 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 JTBO76095 146 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 GIG44P09565 113 aaPredicted RBP11.76□□□□□ -0.53
USP39-205ENST00000442708 RHOBP62745 196 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 LGALSLQ3ZCW2 172 aaPredicted RBP11.76□□□□□ -0.53
USP39-205ENST00000442708 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
USP39-205ENST00000442708 FXYD5Q96DB9 178 aa11.76□□□□□ -0.53
USP39-205ENST00000442708 GNPNAT1Q96EK6 184 aaPredicted RBP11.76□□□□□ -0.53
USP39-205ENST00000442708 SAV1Q9H4B6 383 aaPredicted RBP11.76□□□□□ -0.53
USP39-205ENST00000442708 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
USP39-205ENST00000442708 KIR2DL5BA0A0G2JN68 375 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 KIR2DL5BA0A0G2JPC4 375 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 A0A0J9YX75 114 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 BCL2L11O43521 198 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 OR10J4P0C629 311 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 ZNF705DP0CH99 300 aaPredicted RBP11.75□□□□□ -0.53
USP39-205ENST00000442708 ZNF705BP0CI00 300 aaPredicted RBP11.75□□□□□ -0.53
USP39-205ENST00000442708 HIST1H1EP10412 219 aaKnown RBP11.75□□□□□ -0.53
USP39-205ENST00000442708 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 SERF2P84101 59 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 PSG3Q16557 428 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 FOXI2Q6ZQN5 318 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 KIR2DL5AQ8N109 375 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 KIR2DL5BQ8NHK3 375 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 OR51M1Q9H341 326 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 RPRMQ9NS64 109 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
USP39-205ENST00000442708 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
USP39-205ENST00000442708 HMGB3O15347 200 aaKnown RBP11.74□□□□□ -0.53
USP39-205ENST00000442708 SPP1P10451 314 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 C4BPBP20851 252 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 APOC4P55056 127 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 GUK1Q16774 197 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 SSX7Q7RTT5 188 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 SLC50A1Q9BRV3 221 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
USP39-205ENST00000442708 OR7C2O60412 319 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 DEFB135Q30KP9 77 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 RNF141Q8WVD5 230 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 RCHY1Q96PM5 261 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 SPATA25Q9BR10 227 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 U3KQK5 164 aa11.73□□□□□ -0.53
USP39-205ENST00000442708 A0A1W2PPV4 95 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 A8MTW9 85 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 PRAC2D3DTV9 90 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 ZNF253O75346 499 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
USP39-205ENST00000442708 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 KHDC3LQ587J8 217 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 RAB24Q969Q5 203 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
USP39-205ENST00000442708 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
USP39-205ENST00000442708 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
USP39-205ENST00000442708 UBE2CO00762 179 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 CA1P00915 261 aaPredicted RBP11.71□□□□□ -0.53
USP39-205ENST00000442708 MBP02144 154 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 TAS2R45P59539 299 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
USP39-205ENST00000442708 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 Q6ZWC4 215 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 EXOC3-AS1Q8N2X6 119 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 OR4B1Q8NGF8 309 aa11.71□□□□□ -0.53
USP39-205ENST00000442708 HYLS1Q96M11 299 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms