RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 M0R3E3 92 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 OR2J3O76001 311 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 C5orf17Q8NAS9 161 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
NLE1-202ENST00000442241 VAMP3Q15836 100 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 UBTD1Q9HAC8 227 aa12.67□□□□□ -0.38
NLE1-202ENST00000442241 TAX1BP3O14907 124 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
NLE1-202ENST00000442241 IGFL4Q6B9Z1 124 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 P01737 135 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 NHLH1Q02575 133 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 MPV17L2Q567V2 206 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 MLST8Q9BVC4 326 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 ST20Q9HBF5 79 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
NLE1-202ENST00000442241 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
NLE1-202ENST00000442241 URB1-AS1Q96HZ7 61 aa12.65□□□□□ -0.38
NLE1-202ENST00000442241 TMEM70Q9BUB7 260 aa12.65□□□□□ -0.38
NLE1-202ENST00000442241 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
NLE1-202ENST00000442241 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
NLE1-202ENST00000442241 LTAP01374 205 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 UQCRFS1P47985 274 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 ZNF491Q8N8L2 437 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 OR11H6Q8NGC7 330 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 KLF12Q9Y4X4 402 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.39
NLE1-202ENST00000442241 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
NLE1-202ENST00000442241 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 DAZAP1Q96EP5 407 aaKnown RBP12.64□□□□□ -0.39
NLE1-202ENST00000442241 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 OR2T8A6NH00 312 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 GNG7O60262 68 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 IGLV2-11P01706 119 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 PLP1P60201 277 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 Q86TA4 180 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
NLE1-202ENST00000442241 BVES-AS1Q5T3Y7 98 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 FMC1Q96HJ9 113 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 FANCD2OSQ96PS1 177 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 PRTN3P24158 256 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 COL8A1P27658 744 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 ZNF138P52744 262 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 SMIM15Q7Z3B0 74 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 CLEC5AQ9NY25 188 aa12.63□□□□□ -0.39
NLE1-202ENST00000442241 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 ZNF785A8K8V0 405 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 ODF3BA8MYP8 253 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 MUC21Q5SSG8 566 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 ERASQ7Z444 233 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
NLE1-202ENST00000442241 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 HLA-DRB1P01911 266 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 CEACAM3P40198 252 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 SHANK2-AS3Q9BTD1 123 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 RNF24Q9Y225 148 aa12.62□□□□□ -0.39
NLE1-202ENST00000442241 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 TMSB15BA0A087X1C1 80 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
NLE1-202ENST00000442241 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 NUDT3O95989 172 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 ATP5L2Q7Z4Y8 100 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
NLE1-202ENST00000442241 F8W735 103 aaPredicted RBP12.6□□□□□ -0.39
NLE1-202ENST00000442241 H3BRN7 92 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 C19orf84I3L1E1 186 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 NDUFA3O95167 84 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 NPBQ8NG41 125 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 PRSS22Q9GZN4 317 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 SPG11Q96JI7 2443 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 TMEM11P17152 192 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 UCNP55089 124 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 SIGLEC15Q6ZMC9 328 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 RNF5Q99942 180 aa12.6□□□□□ -0.39
NLE1-202ENST00000442241 CBY3A6NI87 242 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 A8MWL6 223 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 HBBP68871 147 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 IGHV3OR16-13A0A075B7E8 117 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 IGHV3-74A0A0B4J1X5 117 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 hDV102S1A0JD36 115 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms