RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 C17orf77Q96MU5 243 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 IL4P05112 153 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 HTR1DP28221 377 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 ZNF491Q8N8L2 437 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 SPTBN2O15020 2390 aa13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 SIGLEC15Q6ZMC9 328 aa13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 Q71RC1 249 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 NBR2O15453 112 aa13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
SEMA3B-207ENST00000441915 RIGQ13278 110 aa13.02□□□□□ -0.32
SEMA3B-207ENST00000441915 PSG3Q16557 428 aa13.02□□□□□ -0.32
SEMA3B-207ENST00000441915 LINC00173Q6ZV60 143 aa13.02□□□□□ -0.32
SEMA3B-207ENST00000441915 DPM3Q9P2X0 92 aa13.02□□□□□ -0.32
SEMA3B-207ENST00000441915 MAP1LC3CQ9BXW4 147 aa13.02□□□□□ -0.33
SEMA3B-207ENST00000441915 TMEM191AQ9H0A3 160 aa13.02□□□□□ -0.33
SEMA3B-207ENST00000441915 ST20Q9HBF5 79 aa13.02□□□□□ -0.33
SEMA3B-207ENST00000441915 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
SEMA3B-207ENST00000441915 ZNF785A8K8V0 405 aa13.01□□□□□ -0.33
SEMA3B-207ENST00000441915 ARMS2P0C7Q2 107 aa13.01□□□□□ -0.33
SEMA3B-207ENST00000441915 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
SEMA3B-207ENST00000441915 ZNF138P52744 262 aa13.01□□□□□ -0.33
SEMA3B-207ENST00000441915 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
SEMA3B-207ENST00000441915 GNG7O60262 68 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 ARF6P62330 175 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 ZNF414Q96IQ9 312 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 RAB1BQ9H0U4 201 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 HSPB8Q9UJY1 196 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 OVOL3O00110 214 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 CSN3P07498 182 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 CEACAM3P40198 252 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 ASCL2Q99929 193 aa13□□□□□ -0.33
SEMA3B-207ENST00000441915 A0A1B0GW15 77 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 Q6AWC8 147 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 ABCA4P78363 2273 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 M0R3E3 92 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 PET117Q6UWS5 81 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 NPBQ8NG41 125 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 OR11H6Q8NGC7 330 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 CFHR4Q92496 578 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-207ENST00000441915 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 NDUFA3O95167 84 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 PDE6HQ13956 83 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 HES1Q14469 280 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 S4R3C0 116 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 TLN1Q9Y490 2541 aaKnown RBP12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 hDV102S1A0JD36 115 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 K7ERU9 68 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 CRIP1P50238 77 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 ERASQ7Z444 233 aa12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 NEU4Q8WWR8 484 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-207ENST00000441915 GATD1Q8NB37 220 aa12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 TIMM8BQ9Y5J9 83 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 H0Y8G0 127 aa12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 PTPRZ1P23471 2315 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 MFAP4P55083 255 aa12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
SEMA3B-207ENST00000441915 LRBAP50851 2863 aa12.96□□□□□ -0.33
SEMA3B-207ENST00000441915 LY6HO94772 140 aa12.96□□□□□ -0.33
SEMA3B-207ENST00000441915 GRNP28799 593 aaKnown RBP12.96□□□□□ -0.33
SEMA3B-207ENST00000441915 CSN1S1P47710 185 aa12.96□□□□□ -0.33
SEMA3B-207ENST00000441915 ARHGAP32A7KAX9 2087 aa12.96□□□□□ -0.33
SEMA3B-207ENST00000441915 K7ENP7 123 aa12.96□□□□□ -0.34
SEMA3B-207ENST00000441915 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.34
SEMA3B-207ENST00000441915 PRSS3P2Q8NHM4 247 aa12.96□□□□□ -0.34
SEMA3B-207ENST00000441915 C8orf49Q96NF6 230 aa12.96□□□□□ -0.34
SEMA3B-207ENST00000441915 FANCD2OSQ96PS1 177 aa12.96□□□□□ -0.34
SEMA3B-207ENST00000441915 RELNP78509 3460 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 NPIPB5A8MRT5 1133 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 KLRD1Q13241 179 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 SERTM2A0A1B0GWG4 89 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 FBXL19-AS1Q494R0 122 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 BCL6BQ8N143 479 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 IGFBPL1Q8WX77 278 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 ZNF48Q96MX3 618 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 CSMD1Q96PZ7 3565 aa12.95□□□□□ -0.34
SEMA3B-207ENST00000441915 M0R1W7 72 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 NBL1P41271 181 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 ZNF562Q6V9R5 426 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 TP73-AS1Q9UF72 201 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 PSG9Q00887 426 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 MPV17L2Q567V2 206 aa12.94□□□□□ -0.34
SEMA3B-207ENST00000441915 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms