RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RPS20P60866 119 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 CFHR3Q02985 330 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 C16orf54Q6UWD8 224 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 CIARTQ8N365 385 aaPredicted RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 RPP21Q9H633 154 aaKnown RBP4.66□□□□□ -1.66
VPS50-205ENST00000441602 U3KQE9 123 aa4.66□□□□□ -1.66
VPS50-205ENST00000441602 ABCA2Q9BZC7 2435 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 ITPR1Q14643 2758 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 LOC105371267A0A1B0GV96 52 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 K7EN84 100 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 LGALS1P09382 135 aaKnown RBP4.65□□□□□ -1.66
VPS50-205ENST00000441602 OR5I1Q13606 314 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 DPF1Q92782 380 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 C16orf92Q96LL3 132 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 ZNF702PQ9H963 129 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 DAZ1Q9NQZ3 744 aaKnown RBP4.65□□□□□ -1.66
VPS50-205ENST00000441602 TMEM160Q9NX00 188 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 V9GYV3 84 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 ATMQ13315 3056 aa4.65□□□□□ -1.66
VPS50-205ENST00000441602 RBAKDNA6NC62 111 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 IZUMO1RA6ND01 250 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.67
VPS50-205ENST00000441602 GPHB5Q86YW7 130 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 FRZBQ92765 325 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 NAT8BQ9UHF3 227 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 CELSR3Q9NYQ7 3312 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 DCHS1Q96JQ0 3298 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 IGHV7-4-1A0A0J9YVY3 117 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 SLC17A3O00476 420 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 CHEK1O14757 476 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 IGLV2-8P01709 118 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 PSMB8P28062 276 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 AKR1D1P51857 326 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 NDUFA6P56556 154 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 Q8N2B8 174 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 NUDT10Q8NFP7 164 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 TSKUQ8WUA8 353 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 NUDT11Q96G61 164 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 UBE2E2Q96LR5 201 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 LINC00479Q96M42 142 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 RNASE7Q9H1E1 156 aaKnown RBP4.65□□□□□ -1.67
VPS50-205ENST00000441602 KLK15Q9H2R5 256 aa4.65□□□□□ -1.67
VPS50-205ENST00000441602 ABCA1O95477 2261 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 IGHV3OR16-8A0A075B7F1 116 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 OVOL1O14753 267 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 HLA-DQA1P01909 254 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 TRGC2P03986 189 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 S100A2P29034 98 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
VPS50-205ENST00000441602 SMUG1Q53HV7 270 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 TMEM78Q5T7P6 136 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 Q6AWC8 147 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 NHLRC2Q8NBF2 726 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 LRRK2Q5S007 2527 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 NAV2Q8IVL1 2488 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 RAB4BP61018 213 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 TMEM95Q3KNT9 176 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 LCN12Q6JVE5 192 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 ATP5L2Q7Z4Y8 100 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 GLMPQ8WWB7 406 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 SMPXQ9UHP9 88 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 BOD1L1Q8NFC6 3051 aa4.64□□□□□ -1.67
VPS50-205ENST00000441602 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 CLPSL1A2RUU4 121 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 SRD5A1P18405 259 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 KHDC1LQ5JSQ8 128 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 REC114Q7Z4M0 266 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 ZNF738Q8NE65 137 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 OR10J6PQ8NGY7 276 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 WFDC12Q8WWY7 111 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 ZFHX4Q86UP3 3567 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 DOPEY2Q9Y3R5 2298 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 IGHV3-49A0A0A0MS15 119 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 A0A1B0GW15 77 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 SMIM27A0A1W2PRY6 76 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 M0R3E3 92 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 TCL1AP56279 114 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 PAFAH1B2P68402 229 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 FABP9Q0Z7S8 132 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 RIGQ13278 110 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 ACTL10Q5JWF8 245 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 Q6ZS46 218 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 C8orf86Q6ZUL3 223 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 IL17RELQ6ZVW7 336 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 RNF152Q8N8N0 203 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 ASCL2Q99929 193 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 MLST8Q9BVC4 326 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 RHPN1-AS1Q9BWJ2 59 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 GNB1LQ9BYB4 327 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 PEMTQ9UBM1 199 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 IGHV3OR16-13A0A075B7E8 117 aa4.63□□□□□ -1.67
VPS50-205ENST00000441602 IGHV3-74A0A0B4J1X5 117 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms